RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RMND5AQ9H871 391 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 COQ10BQ9H8M1 238 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MEAF6Q9HAF1 191 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SLC38A10Q9HBR0 1119 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 A4GALTQ9NPC4 353 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF302Q9NR11 478 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SERINC1Q9NRX5 453 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 AGPAT4Q9NRZ5 378 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 C20orf96Q9NUD7 363 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 INTS10Q9NVR2 710 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 ADA2Q9NZK5 511 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 BFARQ9NZS9 450 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TMEM216Q9P0N5 145 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SPATA7Q9P0W8 599 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ACTR3BQ9P1U1 418 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TMEM181Q9P2C4 612 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CD300AQ9UGN4 299 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZDHHC2Q9UIJ5 367 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CPSF3Q9UKF6 684 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 PSME2Q9UL46 239 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ABT1Q9ULW3 272 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 NDUFAF1Q9Y375 327 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MTF2Q9Y483 593 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 TRIM17Q9Y577 477 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 HEY1Q9Y5J3 304 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TSC2P49815 1807 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PHIPQ8WWQ0 1821 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF236Q9UL36 1845 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 TRIP11Q15643 1979 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SCN9AQ15858 1988 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 A0A0G2JMZ2 1700 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 LRRC37A2A6NM11 1700 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 DOCK1Q14185 1865 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 IGKV6D-21A0A0A0MT36 114 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 IGLV9-49A0A0B4J1Y8 123 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 RNF103-CHMP3A0A140T963 221 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 DHRS12A0PJE2 317 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 NEMP2A6NFY4 417 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 SAGE2PA6NJ88 616 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 BOLA2-SMG1P6H3BVE0 249 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 TRIM77I1YAP6 450 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 K7EPI3 171 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 M0QX08 132 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 UBXN8O00124 270 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 RNF103O00237 685 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 UBDO15205 165 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 MAGEB3O15480 346 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 CLOCKO15516 846 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 SPRY1O43609 319 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 UGT1A9O60656 530 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 MRPS14O60783 128 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 PRKRAO75569 313 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 ZMPSTE24O75844 475 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PIAS1O75925 651 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 SORBS2O94875 1100 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 AP2A1O95782 977 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 NPPAP01160 153 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 AMBPP02760 352 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 UGT2B4P06133 528 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 C2P06681 752 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 RBP1P09455 135 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PRSS56P0CW18 603 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 ERVK-10P10266 1014 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 MBL2P11226 248 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 HSD17B1P14061 328 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 STMN1P16949 149 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 HOXB8P17481 243 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 UGT1A6P19224 532 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 EFNA1P20827 205 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 UGT1A4P22310 534 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 IL4RP24394 825 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PTPN3P26045 913 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 IL12AP29459 219 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 CHRNB4P30926 498 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 CEACAM8P31997 349 aaPredicted RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 UGT1A3P35503 534 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 UGT1A5P35504 534 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 MNDAP41218 407 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 LEPRP48357 1165 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 HCAR3P49019 387 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 EIF2B2P49770 351 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 SLC26A2P50443 739 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 CSRP3P50461 194 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 ERFP50548 548 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 RAB28P51157 221 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PPP5CP53041 499 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 MAPK12P53778 367 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PKNOX1P55347 436 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 RPS6P62753 249 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 KCNJ10P78508 379 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 TFAMQ00059 246 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 PRKCZQ05513 592 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 RIPPLY1Q0D2K3 151 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 CDC20Q12834 499 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 CDH17Q12864 832 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 IL18R1Q13478 541 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 PEX6Q13608 980 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 FASTKQ14296 549 aaKnown RBP2.39□□□□□ -2.03
VPS41-206ENST00000418457 PRPSAP1Q14558 356 aa2.39□□□□□ -2.03
VPS41-206ENST00000418457 OXA1LQ15070 435 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms