RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ZNF649Q9BS31 505 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ENKD1Q9H0I2 346 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 RNF121Q9H920 327 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 IL23AQ9NPF7 189 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SYNDIG1LA6NDD5 238 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 GABRPO00591 440 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 EMC8O43402 210 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 RAB25P57735 213 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 FZD5Q13467 585 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 AGERQ15109 404 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 CDK10Q15131 360 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 VASNQ6EMK4 673 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 MRGPREQ86SM8 312 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SIRT6Q8N6T7 355 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ARIH2OSQ8N7S6 290 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 OR7G2Q8NG99 324 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 OR4E2Q8NGC2 313 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 OR56A1Q8NGH5 318 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 PIGXQ8TBF5 258 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 CDS1Q92903 461 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SAMD8Q96LT4 415 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ZNF681Q96N22 645 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ATF6BQ99941 703 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SLC6A17Q9H1V8 727 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 PPP1R3EQ9H7J1 279 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 NLKQ9UBE8 527 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SLC7A7Q9UM01 511 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 EXOSC1Q9Y3B2 195 aaKnown RBP13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SCN2AQ99250 2005 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 MDC1Q14676 2089 aaKnown RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 FAM172BPA6NC97 362 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 SNTNA6NMZ2 147 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 HYAL3O43820 417 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 CEACAM5P06731 702 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 PKLRP30613 574 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 ID2Q02363 134 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 GNA13Q14344 377 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 CST6Q15828 149 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 CCDC85BQ15834 202 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 NDUFA5Q16718 116 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 PSRC1Q6PGN9 363 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 CD200R1LQ6Q8B3 271 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 VASH1Q7L8A9 365 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 NR2C2APQ86WQ0 139 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 POGLUT1Q8NBL1 392 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 SMAP2Q8WU79 429 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 RAB7BQ96AH8 199 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 GIMAP5Q96F15 307 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 ARHGDIGQ99819 225 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM74BQ9NUR3 256 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 CBLCQ9ULV8 474 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 EML2O95834 649 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 PRG2P13727 222 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 FGF9P31371 208 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 IFNGR2P38484 337 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 DMPKQ09013 629 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 TATDN3Q17R31 274 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 OR2L8Q8NGY9 312 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 ADAMTS15Q8TE58 950 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 AP3S1Q92572 193 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 SLC41A3Q96GZ6 507 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 RNF170Q96K19 258 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 NDEL1Q9GZM8 345 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 BTBD1Q9H0C5 482 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 IL20Q9NYY1 176 aa13.53□□□□□ -0.24
HDAC9-208ENST00000417496 SIRT4Q9Y6E7 314 aaPredicted RBP13.53□□□□□ -0.24
HDAC9-208ENST00000417496 KNL1Q8NG31 2342 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 TRDV1A0A1B0GX56 115 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 GKN3PP0CG01 181 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.24
HDAC9-208ENST00000417496 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.24
HDAC9-208ENST00000417496 DUSP6Q16828 381 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 TJAP1Q5JTD0 557 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 SNAP47Q5SQN1 464 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 LCN1P1Q5VSP4 162 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 TANGO2Q6ICL3 276 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 PLBD1Q6P4A8 553 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 VITQ6UXI7 678 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 IL20RBQ6UXL0 311 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM91Q6ZNR0 172 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 GET4Q7L5D6 327 aaPredicted RBP13.52□□□□□ -0.24
HDAC9-208ENST00000417496 ZNF438Q7Z4V0 828 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 TMEFF1Q8IYR6 380 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 GALNT6Q8NCL4 622 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 C19orf18Q8NEA5 215 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 TTLQ8NG68 377 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 GANCQ8TET4 914 aa13.52□□□□□ -0.24
HDAC9-208ENST00000417496 ACOT11Q8WXI4 607 aaPredicted RBP13.52□□□□□ -0.24
HDAC9-208ENST00000417496 HCAR1Q9BXC0 346 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms