RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KCNH1O95259 989 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 LINC00032P0C843 101 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 TCEA1P23193 301 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 ALDH3A1P30838 453 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 ASMTP46597 345 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 DIO3P55073 304 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 MANFP55145 182 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 EEFSECP57772 596 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 HSPB3Q12988 150 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 GLYR1Q49A26 553 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 VPS26BQ4G0F5 336 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 RFTN2Q52LD8 501 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 P4HA3Q7Z4N8 544 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 TRABD2AQ86V40 505 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 MEIOBQ8N635 442 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 BANPQ8N9N5 519 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 LINC01560Q8TB33 94 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 DUSP19Q8WTR2 217 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 RMND5BQ96G75 393 aaPredicted RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 TSSK3Q96PN8 268 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 EML4Q9HC35 981 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 HHATLQ9HCP6 504 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 FLRT3Q9NZU0 649 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 SH3BP4Q9P0V3 963 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 ST6GALNAC2Q9UJ37 374 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 DNAJC15Q9Y5T4 150 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 ABCA4P78363 2273 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 LSM1O15116 133 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 NKX2-2O95096 273 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 UTS2O95399 124 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 CRHP06850 196 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 NUDT17P0C025 328 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 DDX5P17844 614 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 SDC1P18827 310 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 FRKP42685 505 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 CPA2P48052 419 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 RFX3P48380 749 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 RIPPLY3P57055 190 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 RPL38P63173 70 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 STX5Q13190 355 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 ZNF385BQ569K4 471 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 RAET1LQ5VY80 246 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 ANKRD26P1Q6NSI1 321 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 PLXDC2Q6UX71 529 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 LUZP2Q86TE4 346 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 MARCH3Q86UD3 253 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 CDC20BQ86Y33 519 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 CDRT4Q8N9R6 151 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 NUP43Q8NFH3 380 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 OR2W6PQ8NHA6 318 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 GPR151Q8TDV0 419 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 HOXB13Q92826 284 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 CIDECQ96AQ7 238 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 MTERF3Q96E29 417 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 FAM111AQ96PZ2 611 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 FOXC2Q99958 501 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 TBL1XR1Q9BZK7 514 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 RTN4RQ9BZR6 473 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 ANKZF1Q9H8Y5 726 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 EQTNQ9NQ60 294 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 ACSS1Q9NUB1 689 aaPredicted RBP15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 NTMQ9P121 344 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 TRAF6Q9Y4K3 522 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 HIVEP1P15822 2718 aa15.9■□□□□ 0.14
PDLIM2-208ENST00000416159 PRRC2AP48634 2157 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 GXYLT2A0PJZ3 443 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 TGM6O95932 706 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 DNASE1P24855 282 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 MAP3K8P41279 467 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 PRKAG1P54619 331 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 PRR5P85299 388 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 C17orf67Q0P5P2 114 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 PDE7AQ13946 482 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 GALNTL6Q49A17 601 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 ARL13AQ5H913 290 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 FBXW10Q5XX13 1052 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 OR2A2Q6IF42 318 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 LRIG3Q6UXM1 1119 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 R3HCC1LQ7Z5L2 792 aaKnown RBP15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 DDIASQ8IXT1 998 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 UBQLNLQ8IYU4 475 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 GCNT2Q8N0V5 402 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 TWIST2Q8WVJ9 160 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 C1GALT1C1Q96EU7 318 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 PIGQQ9BRB3 760 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 ROPN1BQ9BZX4 212 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 LIME1Q9H400 295 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 ROPN1Q9HAT0 212 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 CCM2LQ9NUG4 571 aaPredicted RBP15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 BAIAP2L1Q9UHR4 511 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 PACSIN3Q9UKS6 424 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 ZNF337Q9Y3M9 751 aa15.89■□□□□ 0.13
PDLIM2-208ENST00000416159 IGLV3-32A0A0A0MS00 114 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 A0A1W2PNV4 684 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 OR2M5A3KFT3 312 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 A8MXE2 369 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 EMC8O43402 210 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 TNFRSF21O75509 655 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 ANGPTL1O95841 491 aa15.88■□□□□ 0.13
PDLIM2-208ENST00000416159 IGKV1D-16P01601 117 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms