RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 RPS27LQ71UM5 84 aaKnown RBP13.8□□□□□ -0.2
DDX56-202ENST00000415758 GGNQ86UU5 652 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 OR5M1Q8NGP8 315 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 DUSP19Q8WTR2 217 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 PLPPR2Q96GM1 343 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 GMPPAQ96IJ6 420 aaPredicted RBP13.8□□□□□ -0.2
DDX56-202ENST00000415758 FANCFQ9NPI8 374 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 FAM120CQ9NX05 1096 aaKnown RBP13.8□□□□□ -0.2
DDX56-202ENST00000415758 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 A0A087WV62 115 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 SS18L1O75177 396 aaPredicted RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 COQ9O75208 318 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 SLITRK5O94991 958 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 NID1P14543 1247 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 HSD17B3P37058 310 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 RAE1P78406 368 aaKnown RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 DMTNQ08495 405 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 CLEC12BQ2HXU8 276 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 TSNAXIP1Q2TAA8 658 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 PODNL1Q6PEZ8 512 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 BEND4Q6ZU67 534 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 FAM9CQ8IZT9 166 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 TMEM151AQ8N4L1 468 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 EXOSC8Q96B26 276 aaKnown RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 C11orf24Q96F05 449 aaPredicted RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 HBEGFQ99075 208 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 MRPL57Q9BQC6 102 aaKnown RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 RAB17Q9H0T7 212 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 GLRX2Q9NS18 164 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 GIMAP4Q9NUV9 329 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 PAQR5Q9NXK6 330 aaPredicted RBP13.79□□□□□ -0.2
DDX56-202ENST00000415758 FLRT3Q9NZU0 649 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 STOML1Q9UBI4 398 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 GPR52Q9Y2T5 361 aa13.79□□□□□ -0.2
DDX56-202ENST00000415758 CR1P17927 2039 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 MANBAO00462 879 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 TLX2O43763 284 aaPredicted RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 PCDH7O60245 1069 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 OR4F21O95013 312 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 PSMG1O95456 288 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 IL33O95760 270 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 SBK3P0C264 359 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 PSMB1P20618 241 aaKnown RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 SLC6A8P48029 635 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 CLK3P49761 638 aaKnown RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 RPS4XP62701 263 aaKnown RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 C17orf67Q0P5P2 114 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 DECR1Q16698 335 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 GALNT18Q6P9A2 607 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 HIPK1Q86Z02 1210 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 LILRB1Q8NHL6 650 aaPredicted RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 C16orf78Q8WTQ4 265 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 ACTR6Q9GZN1 396 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 ACSS3Q9H6R3 686 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 SIRT5Q9NXA8 310 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 SENP1Q9P0U3 644 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 NFU1Q9UMS0 254 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 C19orf53Q9UNZ5 99 aaPredicted RBP13.78□□□□□ -0.2
DDX56-202ENST00000415758 LAMP3Q9UQV4 416 aa13.78□□□□□ -0.2
DDX56-202ENST00000415758 A8MT66 165 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 MYO1GB0I1T2 1018 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 RNF223E7ERA6 249 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 ADAMDEC1O15204 470 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 KRT6AP02538 564 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 KRT6BP04259 564 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 THBS1P07996 1170 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 CHN1P15882 459 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 TSPAN8P19075 237 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 IDUAP35475 653 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 GSTM5P46439 218 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 KRT6CP48668 564 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 CTBP2P56545 445 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 PRR5P85299 388 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 CLCQ05315 142 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 C2orf54Q08AI8 447 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 STX5Q13190 355 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 SPIN4Q56A73 249 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 HMBOX1Q6NT76 420 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 MARCH3Q86UD3 253 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX56-202ENST00000415758 TRMT61AQ96FX7 289 aaKnown RBP13.77□□□□□ -0.21
DDX56-202ENST00000415758 ADGRG7Q96K78 797 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 FUT8Q9BYC5 575 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 REG4Q9BYZ8 158 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 PRRG4Q9BZD6 226 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 MRPL46Q9H2W6 279 aaKnown RBP13.77□□□□□ -0.21
DDX56-202ENST00000415758 TAS2R7Q9NYW3 318 aa13.77□□□□□ -0.21
DDX56-202ENST00000415758 MRTO4Q9UKD2 239 aaKnown RBP13.77□□□□□ -0.21
DDX56-202ENST00000415758 GNG14A0A1W2PPG7 69 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 RNF212BA8MTL3 300 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 EIF1AYO14602 144 aaKnown RBP13.76□□□□□ -0.21
DDX56-202ENST00000415758 ULK1O75385 1050 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 PLGP00747 810 aaPredicted RBP13.76□□□□□ -0.21
DDX56-202ENST00000415758 IFNA2P01563 188 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 DANCRP0C864 163 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 ZNF17P17021 662 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 PHBP35232 272 aa13.76□□□□□ -0.21
DDX56-202ENST00000415758 EIF1AXP47813 144 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms