RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 HEATR5AQ86XA9 2040 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 CFAP73A6NFT4 308 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 AGAP5A6NIR3 686 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 CXCR6O00574 342 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 ARPC2O15144 300 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 FADS1O60427 444 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 UGT2B17O75795 530 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 MFN2O95140 757 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 NR2F1P10589 423 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 NQO1P15559 274 aaKnown RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 TBXA2RP21731 343 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 MSX2P35548 267 aaPredicted RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 ADH7P40394 386 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 NRG3P56975 720 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 TMPRSS3P57727 454 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 DEFB109BQ30KR1 87 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 INTS11Q5TA45 600 aaKnown RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 FNDC7Q5VTL7 733 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 BROXQ5VW32 411 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 B3GNTL1Q67FW5 361 aaPredicted RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 GLYATQ6IB77 296 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 FIGNL1Q6PIW4 674 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 OPN5Q6U736 354 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 OLIG3Q7RTU3 272 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 NUP54Q7Z3B4 507 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 C16orf62Q7Z3J2 963 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 PATL1Q86TB9 770 aaKnown RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 IFNEQ86WN2 208 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 GPALPP1Q8IXQ4 340 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 ZNF619Q8N2I2 560 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 SLC22A8Q8TCC7 542 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 ZCCHC14Q8WYQ9 949 aaKnown RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 TTC9Q92623 222 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 COL21A1Q96P44 957 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 SECISBP2Q96T21 854 aaKnown RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 EGFL7Q9UHF1 273 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 MAGEL2Q9UJ55 1249 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 MRTO4Q9UKD2 239 aaKnown RBP12.22□□□□□ -0.45
CNN3-203ENST00000415017 ANGPT4Q9Y264 503 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 OR10H1Q9Y4A9 318 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 CHST2Q9Y4C5 530 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 SNX13Q9Y5W8 968 aa12.22□□□□□ -0.45
CNN3-203ENST00000415017 CENPVL1A0A0U1RR11 272 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 TCRBV5S2A0A599 114 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 SLC28A2O43868 658 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 UGT2B11O75310 529 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 OR6B1O95007 311 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 CYP4B1P13584 511 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 ITGA3P26006 1051 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 SOX3P41225 446 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 HLCSP50747 726 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 SSR4P51571 173 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 ATP12AP54707 1039 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 PSMD4P55036 377 aaKnown RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 PLAURQ03405 335 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 PLCXD2Q0VAA5 305 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 MAPK14Q16539 360 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 GPAT3Q53EU6 434 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 KLHL26Q53HC5 615 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 RPS26P11Q5JNZ5 115 aaPredicted RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 FCRLBQ6BAA4 426 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 LRRC69Q6ZNQ3 347 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 SIRT6Q8N6T7 355 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 OR4C3Q8NH37 302 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 APOBEC4Q8WW27 367 aaKnown RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 TAMM41Q96BW9 452 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 FRMD6Q96NE9 622 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 CPNE5Q9HCH3 593 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 DCAF13Q9NV06 445 aaKnown RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 MKLN1Q9UL63 735 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 WDR45Q9Y484 360 aa12.21□□□□□ -0.45
CNN3-203ENST00000415017 PCDHGA9Q9Y5G4 932 aaKnown RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 CHCHD2Q9Y6H1 151 aaPredicted RBP12.21□□□□□ -0.45
CNN3-203ENST00000415017 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 TPRP12270 2363 aaKnown RBP12.2□□□□□ -0.46
CNN3-203ENST00000415017 A0A1W2PQD3 144 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 ANKRD33BA6NCL7 494 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 TMEM247A6NEH6 219 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 A8MUI8 341 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 M0QX08 132 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 REM1O75628 298 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 PDE9AO76083 593 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 EPPINO95925 133 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 THBS1P07996 1170 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 TCN1P20061 433 aaPredicted RBP12.2□□□□□ -0.46
CNN3-203ENST00000415017 CD247P20963 164 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 ATP6V1B2P21281 511 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 PTGDSP41222 190 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 KCNJ5P48544 419 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 TMED10P49755 219 aaKnown RBP12.2□□□□□ -0.46
CNN3-203ENST00000415017 GAS1P54826 345 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 POLE2P56282 527 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 FOXK2Q01167 660 aa12.2□□□□□ -0.46
CNN3-203ENST00000415017 MFAP5Q13361 173 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms