RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 FAM110BQ8TC76 370 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 CDS1Q92903 461 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 THOC1Q96FV9 657 aaKnown RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 C16orf58Q96GQ5 468 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 ZNF317Q96PQ6 595 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PHF12Q96QT6 1004 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 OR7D2Q96RA2 312 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 YIPF4Q9BSR8 244 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 TSPAN10Q9H1Z9 355 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 EXO5Q9H790 373 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PTGES2Q9H7Z7 377 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PROK2Q9HC23 129 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PPP4R1LQ9P1A2 415 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 LIPT1Q9Y234 373 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 A0A096LPI6 279 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 TRGV5A0A0B4J1U4 118 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 A0A1W2PQD3 144 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 GXYLT2A0PJZ3 443 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 ALG1L2C9J202 215 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 AQP7O14520 342 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 ANGPT2O15123 496 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 SLC22A2O15244 555 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 STX11O75558 287 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 TBXA2RP21731 343 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 PTGS2P35354 604 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 C17orf67Q0P5P2 114 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 GNA13Q14344 377 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 BICRALQ6AI39 1079 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 MTERF4Q7Z6M4 381 aaKnown RBP13.38□□□□□ -0.27
LIMS1-206ENST00000414829 FAM26EQ8N5C1 309 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 CHDHQ8NE62 594 aaPredicted RBP13.38□□□□□ -0.27
LIMS1-206ENST00000414829 OR4K17Q8NGC6 315 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 PRR7Q8TB68 274 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 NUDT8Q8WV74 236 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 VPS33AQ96AX1 596 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 SARAFQ96BY9 339 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 NMUR2Q9GZQ4 415 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 GALNT9Q9HCQ5 603 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 SERHLQ9NQF3 203 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 SUCOQ9UBS9 1254 aaKnown RBP13.38□□□□□ -0.27
LIMS1-206ENST00000414829 LEF1Q9UJU2 399 aaPredicted RBP13.38□□□□□ -0.27
LIMS1-206ENST00000414829 SLC5A6Q9Y289 635 aa13.38□□□□□ -0.27
LIMS1-206ENST00000414829 A0A1B0GVC2 190 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 A0A1W2PP18 115 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 NDUFB5O43674 189 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 SCO2O43819 266 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 FADS1O60427 444 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 HPNP05981 417 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 MSX1P28360 303 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 PTPN6P29350 595 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 PTGDSP41222 190 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 UQCRFS1P47985 274 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 FADDQ13158 208 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 TOMM20Q15388 145 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 ARHGAP11BQ3KRB8 267 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 FLYWCH1Q4VC44 716 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 C4orf17Q53FE4 359 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 FIGNL1Q6PIW4 674 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 DNAJC14Q6Y2X3 702 aaPredicted RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 Q6ZPB1 254 aaPredicted RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 TRILQ7L0X0 811 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 SPPL2CQ8IUH8 684 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 OR5D16Q8NGK9 328 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 GTF2H4Q92759 462 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 PMM1Q92871 262 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 INPP5KQ9BT40 448 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 ZNF350Q9GZX5 532 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 UBQLN3Q9H347 655 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 ZNF385DQ9H6B1 395 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 CACYBPQ9HB71 228 aaKnown RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 CALML5Q9NZT1 146 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 OSGIN2Q9Y236 505 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 ZNF835Q9Y2P0 537 aa13.37□□□□□ -0.27
LIMS1-206ENST00000414829 MRPS18CQ9Y3D5 142 aaKnown RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 SPENQ96T58 3664 aaKnown RBP13.37□□□□□ -0.27
LIMS1-206ENST00000414829 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 BBIP1A8MTZ0 92 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 FAM47E-STBD1D6RA91 191 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 GNB5O14775 395 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 CCDC22O60826 627 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 OXSR1O95747 527 aaPredicted RBP13.36□□□□□ -0.27
LIMS1-206ENST00000414829 SRD5A2P31213 254 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 DCTP40126 519 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 CA7P43166 264 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 ZFP36L2P47974 494 aaKnown RBP13.36□□□□□ -0.27
LIMS1-206ENST00000414829 ATP12AP54707 1039 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 RPS26P62854 115 aaKnown RBP13.36□□□□□ -0.27
LIMS1-206ENST00000414829 SF3B4Q15427 424 aaKnown RBP eCLIP13.36□□□□□ -0.27
LIMS1-206ENST00000414829 GRAMD1BQ3KR37 738 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 HEPHL1Q6MZM0 1159 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 AAGABQ6PD74 315 aa13.36□□□□□ -0.27
LIMS1-206ENST00000414829 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms