RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NDUFS1P28331 727 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HOXD9P28356 352 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CD6P30203 668 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SLC6A1P30531 599 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SLC6A6P31641 620 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KDELR2P33947 212 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 AQP2P41181 271 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 NPBWR2P48146 333 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 GLRBP48167 497 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 VEGFCP49767 419 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 IDH3GP51553 393 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SUOXP51687 545 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PLA2G16P53816 162 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CLDN18P56856 261 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KCNJ2P63252 427 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SORDQ00796 357 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CDR2Q01850 454 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 GUCY2DQ02846 1103 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF91Q05481 1191 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FUT7Q11130 342 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HYAL1Q12794 435 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KRR1Q13601 381 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PTGES3Q15185 160 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TPSAB1Q15661 275 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 INPP5JQ15735 1006 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HAGHQ16775 308 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 VWC2Q2TAL6 325 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 POM121L1PQ3SYA9 428 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PTPN20Q4JDL3 420 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF658BQ4V348 819 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SLC35D3Q5M8T2 416 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CERCAMQ5T4B2 595 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 C9orf135Q5VTT2 229 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PLAG1Q6DJT9 500 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FCRL6Q6DN72 434 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 VASNQ6EMK4 673 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SLC8B1Q6J4K2 584 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RHBDF2Q6PJF5 856 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CBLN3Q6UW01 205 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM107Q6UX40 140 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KCTD1Q719H9 257 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CYB5R4Q7L1T6 521 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ADGRD2Q7Z7M1 963 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ISCA2Q86U28 154 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 LDB1Q86U70 411 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TRABD2AQ86V40 505 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CACUL1Q86Y37 369 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CRLF3Q8IUI8 442 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FUNDC1Q8IVP5 155 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FAM219AQ8IW50 185 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TRIM48Q8IWZ4 208 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 AQP12AQ8IXF9 295 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RHOT1Q8IXI2 618 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KLHDC8AQ8IYD2 350 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ADGRF3Q8IZF5 1079 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 APCDD1Q8J025 514 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 LCORLQ8N3X6 602 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 MARVELD2Q8N4S9 558 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 STPG3Q8N7X2 389 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 EXD3Q8N9H8 876 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 LMNTD1Q8N9Z9 388 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HSD17B11Q8NBQ5 300 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FBXO36Q8NEA4 188 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR13C5Q8NGS8 318 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR9A2Q8NGT5 310 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR11L1Q8NGX0 322 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR2L2Q8NH16 312 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR4K15Q8NH41 348 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 WDR36Q8NI36 951 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 STOML3Q8TAV4 291 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 BPIFB1Q8TDL5 484 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 WFIKKN2Q8TEU8 576 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 GIPC3Q8TF64 312 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM239Q8WW34 195 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ST8SIA1Q92185 356 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RAD54LQ92698 747 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CDS1Q92903 461 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RIT1Q92963 219 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SCAMP4Q969E2 229 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PIGTQ969N2 578 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TESCQ96BS2 214 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF486Q96H40 463 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CELF6Q96J87 481 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FOPNLQ96NB1 174 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SERPINB11Q96P15 392 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR2V2Q96R30 315 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PFDN5Q99471 154 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RNF2Q99496 336 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HOPXQ9BPY8 73 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CLSTN3Q9BQT9 956 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 NUDT22Q9BRQ3 303 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SLC35A5Q9BS91 424 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RSG1Q9BU20 258 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 MECRQ9BV79 373 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ST6GALNAC5Q9BVH7 336 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 C1QTNF1Q9BXJ1 281 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FTHL17Q9BXU8 183 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ULBP1Q9BZM6 244 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TRIM9Q9C026 710 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KLHL31Q9H511 634 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms