RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SLC7A7Q9UM01 511 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SLC6A5Q9Y345 797 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 NOP16Q9Y3C1 178 aaKnown RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 S100A9P06702 114 aaKnown RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 APOFQ13790 326 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SLC25A25Q6KCM7 469 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF584Q8IVC4 421 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 ARL14Q8N4G2 192 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 UBE2ZQ9H832 354 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SH2B3Q9UQQ2 575 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 COL22A1Q8NFW1 1626 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 MRPS14O60783 128 aaKnown RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 LDB3O75112 727 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SCRG1O75711 98 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SGSHP51688 502 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 RRADP55042 308 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 TGFBR3Q03167 851 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SRYQ05066 204 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 CHRFAM7AQ494W8 412 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 TMPRSS12Q86WS5 348 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SPRYD4Q8WW59 207 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 FN3KQ9H479 309 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 NMNAT1Q9HAN9 279 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 ACOT13Q9NPJ3 140 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 DCAF13Q9NV06 445 aaKnown RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 CUEDC1Q9NWM3 386 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 PAK1IP1Q9NWT1 392 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 KCMF1Q9P0J7 381 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 TMEM181Q9P2C4 612 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 ERVK-18Q9QC07 812 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 BOKQ9UMX3 212 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-202ENST00000413872 SULT2B1O00204 365 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 MYOGP15173 224 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 KLHL15Q96M94 604 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 OR5B2Q96R09 309 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 EXTL2Q9UBQ6 330 aa16.28■□□□□ 0.2
PHRF1-202ENST00000413872 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 FUT1P19526 365 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 RPS26P11Q5JNZ5 115 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 PLBD1Q6P4A8 553 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 XKR5Q6UX68 686 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 KLBQ86Z14 1044 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 PPP1R14BQ96C90 147 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 SLC5A7Q9GZV3 580 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 MEPEQ9NQ76 525 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 EMCNQ9ULC0 261 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 CA5BQ9Y2D0 317 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 EFCAB7A8K855 629 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 M0R3H8 397 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 ACPPP15309 386 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF182P17025 639 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 RBMXP38159 391 aaKnown RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 RBPJQ06330 500 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 ARSJQ5FYB0 599 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 NKAPLQ5M9Q1 402 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 TMEM201Q5SNT2 666 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 GARNL3Q5VVW2 1013 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 NLGN4XQ8N0W4 816 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 ZNF578Q96N58 590 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-202ENST00000413872 SMIM14Q96QK8 99 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 MYADMQ96S97 322 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 POTEKPQ9BYX7 375 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 RNF215Q9Y6U7 377 aa16.27■□□□□ 0.2
PHRF1-202ENST00000413872 CITO14578 2027 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 ACVR1BP36896 505 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 C3orf33Q6P1S2 294 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 MSLNLQ96KJ4 702 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 WACQ9BTA9 647 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 GORASP2Q9H8Y8 452 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 VAPAQ9P0L0 249 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 STUB1Q9UNE7 303 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 KIAA0100Q14667 2235 aaKnown RBP16.27■□□□□ 0.19
PHRF1-202ENST00000413872 GPR39O43194 453 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 EGFP01133 1207 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 STSP08842 583 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 PSMB5P28074 263 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 IMPA1P29218 277 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 XKRXQ6PP77 449 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 TMED4Q7Z7H5 227 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 OR9A4Q8NGU2 314 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 WDR20Q8TBZ3 569 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 MYLIPQ8WY64 445 aa16.27■□□□□ 0.19
PHRF1-202ENST00000413872 SORBS1Q9BX66 1292 aaKnown RBP16.27■□□□□ 0.19
PHRF1-202ENST00000413872 TRBV11-1A0A0K0K1C0 115 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 GLULP15104 373 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 CD46P15529 392 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 CPOXP36551 454 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 AP2S1P53680 142 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-202ENST00000413872 ZXDBP98169 803 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 LHX8Q68G74 356 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 CDS1Q92903 461 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 RFT1Q96AA3 541 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 SAMD8Q96LT4 415 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 EMC3Q9P0I2 261 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 SPEF1Q9Y4P9 236 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 A0A1B0GVC2 190 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 TLCD2A6NGC4 264 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 UCHL1P09936 223 aa16.26■□□□□ 0.19
PHRF1-202ENST00000413872 CNR2P34972 360 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms