RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PTPRNQ16849 979 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TMEM44Q2T9K0 475 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 FAM74A3Q4VXF1 159 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF648Q5T619 568 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 KIAA1161Q6NSJ0 714 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TSPAN33Q86UF1 283 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 FAM217AQ8IXS0 508 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 OR6V1Q8N148 313 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 KRT78Q8N1N4 520 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 CPXM2Q8N436 756 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 AQP11Q8NBQ7 271 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SPPL2AQ8TCT8 520 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 EEF1AKMT1Q8WVE0 214 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SELENOMQ8WWX9 145 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 FUBP3Q96I24 572 aaKnown RBP eCLIP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 CMTM3Q96MX0 182 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TMEM38AQ9H6F2 299 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PRDM9Q9NQV7 894 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SDHAF3Q9NRP4 125 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PIPOXQ9P0Z9 390 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 MYEF2Q9P2K5 600 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SLC6A14Q9UN76 642 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 MRPS23Q9Y3D9 190 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 KCTD3Q9Y597 815 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PCDHB1Q9Y5F3 818 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 COL4A2P08572 1712 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 GREB1Q4ZG55 1949 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TICRRQ7Z2Z1 1910 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 RAB19A4D1S5 217 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TRAPPC13A5PLN9 417 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 NCF1BA6NI72 391 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ANXA2P2A6NMY6 339 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 NCF1CA8MVU1 366 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 H7C0S8 307 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TAPBPO15533 448 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 IRAK2O43187 625 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 BEST1O76090 585 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 GADD45GO95257 159 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 HAPLN1P10915 354 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ACP2P11117 423 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 IFNGR1P15260 489 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 FCARP24071 287 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PTGER3P43115 390 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 KRT33BQ14525 404 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 RGNQ15493 299 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 CHRNA6Q15825 494 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SYTL3Q4VX76 610 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 C10orf91Q5T1B1 145 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ARMC12Q5T9G4 340 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ANXA8L1Q5VT79 327 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 RTL10Q7L3V2 364 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TAC4Q86UU9 113 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TPRA1Q86W33 373 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 LINC00471Q8N535 108 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 EID2Q8N6I1 236 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TMEM105Q8N8V8 129 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 C7orf57Q8NEG2 295 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PRSS33Q8NF86 280 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 MDGA1Q8NFP4 955 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 OR6K3Q8NGY3 331 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 GOT1L1Q8NHS2 421 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 RGMAQ96B86 450 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 MRPL48Q96GC5 212 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 NARS2Q96I59 477 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SEPT5Q99719 369 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 GAL3ST1Q99999 423 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 C19orf43Q9BQ61 176 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PLA2G2FQ9BZM2 168 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 BCL2L14Q9BZR8 327 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 METTL17Q9H7H0 456 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SEBOXQ9HB31 216 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 CSNK1G1Q9HCP0 422 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF334Q9HCZ1 680 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 TLR8Q9NR97 1041 aaKnown RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 POLE3Q9NRF9 147 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 DNAJC11Q9NVH1 559 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SPHK1Q9NYA1 384 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 UXTQ9UBK9 157 aaPredicted RBP9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 GPR160Q9UJ42 338 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 ACAD8Q9UKU7 415 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 CA14Q9ULX7 337 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 EDARQ9UNE0 448 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 DLGAP4Q9Y2H0 992 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 SNX10Q9Y5X0 201 aa9.99□□□□□ -0.81
NIF3L1-204ENST00000409357 CACNA1IQ9P0X4 2223 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 NUP210Q8TEM1 1887 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 A0A0G2JPF8 293 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 NUDT19A8MXV4 375 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HNRNPCL3B7ZW38 293 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 HHLA1C9JL84 531 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 LGALS8O00214 317 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ZNF593O00488 134 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 SSNA1O43805 119 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 LANCL1O43813 399 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 TMEM127O75204 238 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 ATG12O94817 140 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 UBL3O95164 117 aa9.98□□□□□ -0.81
NIF3L1-204ENST00000409357 CLDN9O95484 217 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms