RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 FAM71E1Q6IPT2 247 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 NDUFAF7Q7L592 441 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 CCDC190Q86UF4 302 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 KLHL36Q8N4N3 616 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 OR4M1Q8NGD0 313 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 C9orf43Q8TAL5 461 aaPredicted RBP7.82□□□□□ -1.16
SNX13-201ENST00000409076 PATE1Q8WXA2 126 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 ZNF566Q969W8 418 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 TSACCQ96A04 125 aaPredicted RBP7.82□□□□□ -1.16
SNX13-201ENST00000409076 UPRTQ96BW1 309 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 SYNPO2LQ9H987 977 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 FBXO34Q9NWN3 711 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 SPHK1Q9NYA1 384 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 FBXL3Q9UKT7 428 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 HSPE1-MOB4S4R3N1 261 aa7.82□□□□□ -1.16
SNX13-201ENST00000409076 E9PI62 339 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ERVH48-1M5A8F1 160 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 IMPA2O14732 288 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 PDX1P52945 283 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 MVDP53602 400 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 OR12D2P58182 307 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SLC25A35Q3KQZ1 300 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 BEX5Q5H9J7 111 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 IRAK1BP1Q5VVH5 260 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 CXXC5Q7LFL8 322 aaKnown RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 ADIPOR2Q86V24 386 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TMC8Q8IU68 726 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 GPR135Q8IZ08 494 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SLC38A6Q8IZM9 456 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TRAM1L1Q8N609 369 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 UBTD2Q8WUN7 234 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 RGMAQ96B86 450 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 PDCD1LG2Q9BQ51 273 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 GABARAPL3Q9BY60 117 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 CWH43Q9H720 699 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 MBNL1Q9NR56 388 aaKnown RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 WDR45Q9Y484 360 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 UNC13CQ8NB66 2214 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 GVINP1Q7Z2Y8 2422 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SH3D21A4FU49 640 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 GRXCR2A6NFK2 248 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 IDSB3KWA1 339 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ZNF670-ZNF695F2Z2N8 137 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 H0YIV9 168 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 BLOC1S5-TXNDC5H3BN57 136 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 KHNYNO15037 678 aaKnown RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 DNAJB6O75190 326 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 CRYZL1O95825 349 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ADH5P11766 374 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TBXA2RP21731 343 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TRHRP34981 398 aaPredicted RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 MLLT3P42568 568 aaPredicted RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 WDR5P61964 334 aaKnown RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 E2F1Q01094 437 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ENTPD8Q5MY95 495 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 KIAA1324Q6UXG2 1013 aaKnown RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 SLC36A4Q6YBV0 504 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ATCAYQ86WG3 371 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TOMM5Q8N4H5 51 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 DNAJB8Q8NHS0 232 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 CCL4L1Q8NHW4 92 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SNX33Q8WV41 574 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 AP3S1Q92572 193 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 PITX2Q99697 317 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FUZQ9BT04 418 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 CLEC4MQ9H2X3 399 aaPredicted RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 ZNF69Q9UC07 566 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FTSJ1Q9UET6 329 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 NAALAD2Q9Y3Q0 740 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 V9GYH0 126 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SCN5AQ14524 2016 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SCN10AQ9Y5Y9 1956 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FXYD6-FXYD2A0A087WZ82 144 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 A0A0B4J293 547 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SNTNA6NMZ2 147 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FAAHO00519 579 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 PEX12O00623 359 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 POLR1CO15160 346 aaPredicted RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 ADAP00813 363 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ARSBP15848 533 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.81□□□□□ -1.16
SNX13-201ENST00000409076 NDUFA5Q16718 116 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FAM209AQ5JX71 171 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TMPRSS9Q7Z410 1059 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FAM219AQ8IW50 185 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 DNAAF1Q8NEP3 725 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 OR5T3Q8NGG3 340 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 TRMT10AQ8TBZ6 339 aaKnown RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 LCN9Q8WX39 176 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ZNF689Q96CS4 500 aaPredicted RBP7.81□□□□□ -1.16
SNX13-201ENST00000409076 C4orf36Q96KX1 117 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ZNF354BQ96LW1 612 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 HCAR1Q9BXC0 346 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 ENKD1Q9H0I2 346 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FXYD6Q9H0Q3 95 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 AUNIPQ9H7T9 357 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 FKRPQ9H9S5 495 aa7.81□□□□□ -1.16
SNX13-201ENST00000409076 SLC35C2Q9NQQ7 365 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms