RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 WDR93Q6P2C0 686 aa17.47■□□□□ 0.39
SMARCB1-204ENST00000407422 EXOC3L1Q86VI1 746 aa17.47■□□□□ 0.39
SMARCB1-204ENST00000407422 CAVIN3Q969G5 261 aa17.47■□□□□ 0.39
SMARCB1-204ENST00000407422 EML4Q9HC35 981 aaKnown RBP17.47■□□□□ 0.39
SMARCB1-204ENST00000407422 FAM120CQ9NX05 1096 aaKnown RBP17.47■□□□□ 0.39
SMARCB1-204ENST00000407422 ABCG2Q9UNQ0 655 aa17.47■□□□□ 0.39
SMARCB1-204ENST00000407422 MED13LQ71F56 2210 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 EEF1E1-BLOC1S5C9J1V9 151 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 EEF1E1O43324 174 aaKnown RBP17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 CTAG2O75638 210 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 UTS2O95399 124 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 ZNF708P17019 499 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 CHMP24386 653 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 OPRM1P35372 400 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 MAP3K8P41279 467 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 TESK1Q15569 626 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 APOOLQ6UXV4 268 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 GALNT10Q86SR1 603 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 FBXO30Q8TB52 745 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 GPR151Q8TDV0 419 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 DUSP19Q8WTR2 217 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 HOXB13Q92826 284 aaPredicted RBP17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 GIMAP5Q96F15 307 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 ZBED6CLQ96FA7 236 aaPredicted RBP17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 RMND5BQ96G75 393 aaPredicted RBP17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 C3orf30Q96M34 536 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 CLCF1Q9UBD9 225 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 ZDHHC2Q9UIJ5 367 aa17.46■□□□□ 0.39
SMARCB1-204ENST00000407422 TYROBPO43914 113 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 PEX11AO75192 247 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 RCBTB2O95199 551 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 SLU7O95391 586 aaKnown RBP17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 XKR7Q5GH72 579 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 SZRD1Q7Z422 152 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 GCNT2Q8N0V5 402 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 NUP43Q8NFH3 380 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 OR5M1Q8NGP8 315 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 ZFP28Q8NHY6 868 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 NUDT8Q8WV74 236 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 INTS12Q96CB8 462 aaKnown RBP17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 DTNBP1Q96EV8 351 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 LRRC46Q96FV0 321 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 UCN2Q96RP3 112 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 JKAMPQ9P055 326 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 NTMQ9P121 344 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 MRTO4Q9UKD2 239 aaKnown RBP17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 ITPR3Q14573 2671 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 VPS13CQ709C8 3753 aa17.45■□□□□ 0.38
SMARCB1-204ENST00000407422 ZNF469Q96JG9 3925 aaPredicted RBP17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 NKX2-2O95096 273 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 TGM6O95932 706 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 IL18BPO95998 194 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 BPGMP07738 259 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 HK1P19367 917 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 ASMTP46597 345 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 PSMD4P55036 377 aaKnown RBP17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 GRAMD1BQ3KR37 738 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 UBQLNLQ8IYU4 475 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 OR6Y1Q8NGX8 325 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 SLC9A6Q92581 669 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 WNT2BQ93097 391 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 C16orf58Q96GQ5 468 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 TM9SF2Q99805 663 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 GPATCH1Q9BRR8 931 aaKnown RBP17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 C3orf14Q9HBI5 128 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 SDHAF3Q9NRP4 125 aa17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 ACSS1Q9NUB1 689 aaPredicted RBP17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 DNAJB12Q9NXW2 375 aaKnown RBP17.44■□□□□ 0.38
SMARCB1-204ENST00000407422 H0YC42 278 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 GMFGO60234 142 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 KCNH1O95259 989 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 ACP2P11117 423 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 ETV4P43268 484 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 TPD52P55327 224 aaPredicted RBP17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 CLDN15P56746 228 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 PTGR1Q14914 329 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 FLYWCH1Q4VC44 716 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 RAET1LQ5VY80 246 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 CDRT4Q8N9R6 151 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 SLC16A11Q8NCK7 471 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 OR7A2PQ8NGA2 310 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 CEP70Q8NHQ1 597 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 MTERF3Q96E29 417 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 OTUB1Q96FW1 271 aaPredicted RBP17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 PPP3R2Q96LZ3 170 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 MS4A4EQ96PG1 132 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 C1orf50Q9BV19 199 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 TBL1XR1Q9BZK7 514 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 FOXD3Q9UJU5 478 aaPredicted RBP17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 ZNF337Q9Y3M9 751 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 TTC36A6NLP5 189 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 SKAP2O75563 359 aaPredicted RBP17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 ANGPTL1O95841 491 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 PEX19P40855 299 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 CLK3P49761 638 aaKnown RBP17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 PRR5P85299 388 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 BCL2A1Q16548 175 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 DUSP5Q16690 384 aa17.43■□□□□ 0.38
SMARCB1-204ENST00000407422 C6orf136Q5SQH8 315 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms