RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 FGBP02675 491 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 PRKAR1BP31321 381 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 THBS2P35442 1172 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 AGFG1P52594 562 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 RIN1Q13671 783 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 GPAT3Q53EU6 434 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 FAAH2Q6GMR7 532 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 ZNF544Q6NX49 715 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 BHLHB9Q6PI77 547 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 ATP6V1C2Q8NEY4 427 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 EQTNQ9NQ60 294 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 HINT3Q9NQE9 182 aaKnown RBP9.19□□□□□ -0.94
MSH2-202ENST00000406134 STON1Q9Y6Q2 735 aa9.19□□□□□ -0.94
MSH2-202ENST00000406134 EMC8O43402 210 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 HPGDSO60760 199 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 PRG2P13727 222 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 GSTM3P21266 225 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 DEFA1P59665 94 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 DEFA3P59666 94 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ARPC4P59998 168 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 DECR1Q16698 335 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 FAM109BQ6ICB4 259 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 B3GLCTQ6Y288 498 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 HSDL2Q6YN16 418 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 OR56A1Q8NGH5 318 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 DNAJA4Q8WW22 397 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 CAPSLQ8WWF8 208 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 CDS1Q92903 461 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 TM4SF19Q96DZ7 209 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 C1QTNF2Q9BXJ5 285 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 MKRN2Q9H000 416 aaKnown RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 ANKRD19PQ9H560 264 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 CD93Q9NPY3 652 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 C20orf141Q9NUB4 165 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 GIMAP4Q9NUV9 329 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 FBXO34Q9NWN3 711 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ZNF443Q9Y2A4 671 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 GOLGA4Q13439 2230 aaKnown RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 SH3BP5O60239 455 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 NTSP30990 170 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 RPS5P46782 204 aaKnown RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 MFSD12Q6NUT3 480 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ADCK2Q7Z695 626 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 OR2L13Q8N349 312 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 SLC7A6Q92536 515 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 SUSD6Q92537 303 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 KIAA1143Q96AT1 154 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 ARSGQ96EG1 525 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 BBS4Q96RK4 519 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 OSGEPL1Q9H4B0 414 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 RERGLQ9H628 205 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 FGF22Q9HCT0 170 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ZNF221Q9UK13 617 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ITGB1BP2Q9UKP3 347 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 PRELID1Q9Y255 219 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 CCDC182A6NF36 153 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 K7EQS6 105 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 BHLHE40O14503 412 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 SCO2O43819 266 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 KAT7O95251 611 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 PPP2R1BP30154 601 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 KIR2DL1P43626 348 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 AVPR1BP47901 424 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 TAS2R41P59536 307 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 KRR1Q13601 381 aaKnown RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 TRAM2Q15035 370 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 PGGHGQ32M88 737 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ZNF791Q3KP31 576 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 KLHL22Q53GT1 634 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 FAM131AQ6UXB0 335 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 MBOAT2Q6ZWT7 520 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 C11orf74Q86VG3 221 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 NRMQ8IXM6 262 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 TMEM145Q8NBT3 493 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 TMEM52Q8NDY8 209 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 TTLQ8NG68 377 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 GANCQ8TET4 914 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 UPRTQ96BW1 309 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ZC3HAV1LQ96H79 300 aaKnown RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 CEP19Q96LK0 163 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 KCTD7Q96MP8 289 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 MOV10Q9HCE1 1003 aaKnown RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 RANGRFQ9HD47 186 aaPredicted RBP9.18□□□□□ -0.94
MSH2-202ENST00000406134 TBC1D29Q9UFV1 150 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 CSNK1G3Q9Y6M4 447 aa9.18□□□□□ -0.94
MSH2-202ENST00000406134 TBC1D3BA6NDS4 549 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 AGRPO00253 132 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 BTN3A3O00478 584 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 GABRPO00591 440 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 ADAM11O75078 769 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 MAKP20794 623 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 HTR1FP30939 366 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 MAP3K8P41279 467 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 STXBP1P61764 594 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 DSG2Q14126 1118 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 DUSP5Q16690 384 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 RSBN1Q5VWQ0 802 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 FBXO42Q6P3S6 717 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms