RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ATP6V1HQ9UI12 483 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 ABCG2Q9UNQ0 655 aa12.08□□□□□ -0.48
SDF4-203ENST00000403997 DCHS2Q6V1P9 2916 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 MBD3L4A6NDZ8 208 aaPredicted RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 MBD3L3A6NE82 208 aaPredicted RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 MBD3L5A6NJ08 208 aaPredicted RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 B4DXG7 233 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 SYT5O00445 386 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 SCAMP2O15127 329 aaKnown RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 EMC8O43402 210 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 HSPA4LO95757 839 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 TMIGD3P0DMS9 266 aaPredicted RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 CHMP24386 653 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 CTSSP25774 331 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 RPL3P39023 403 aaKnown RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 FRKP42685 505 aaPredicted RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 SERPINB4P48594 390 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 LHX2P50458 406 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 ZNF136P52737 540 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 DGKQP52824 942 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 CHI3L2Q15782 390 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 C6orf136Q5SQH8 315 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 EXOC3L1Q86VI1 746 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 FADS6Q8N9I5 356 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 CDRT4Q8N9R6 151 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 C9orf106Q8NAJ2 232 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 FNDC5Q8NAU1 212 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 OR6Y1Q8NGX8 325 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 MBD3L2Q8NHZ7 208 aaPredicted RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 TUBGCP3Q96CW5 907 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 C1orf50Q9BV19 199 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 TBL1XR1Q9BZK7 514 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 RTN4RQ9BZR6 473 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 FAM120CQ9NX05 1096 aaKnown RBP12.07□□□□□ -0.48
SDF4-203ENST00000403997 NTMQ9P121 344 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 ITGB1BP2Q9UKP3 347 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 RAB21Q9UL25 225 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 SNX8Q9Y5X2 465 aa12.07□□□□□ -0.48
SDF4-203ENST00000403997 A0A1W2PRB8 838 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 CLCA1A8K7I4 914 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 ESPNB1AK53 854 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 ITM2AO43736 263 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 LYPLA1O75608 230 aaPredicted RBP12.06□□□□□ -0.48
SDF4-203ENST00000403997 NKX2-2O95096 273 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 SERPINE1P05121 402 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 ALOX5P09917 674 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 ACP2P11117 423 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 LAMP1P11279 417 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 HK1P19367 917 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 OPRM1P35372 400 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 MAP3K8P41279 467 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 KIR2DL3P43628 341 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 ASCL1P50553 236 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 GRAMD1BQ3KR37 738 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 CEP85LQ5SZL2 805 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 CPTPQ5TA50 214 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 POMZP3Q6PJE2 187 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 PLXDC2Q6UX71 529 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 CHMP1BQ7LBR1 199 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 GALNT10Q86SR1 603 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 FBXO30Q8TB52 745 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 HOXB13Q92826 284 aaPredicted RBP12.06□□□□□ -0.48
SDF4-203ENST00000403997 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
SDF4-203ENST00000403997 WNT2BQ93097 391 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 MS4A4EQ96PG1 132 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 PRPF18Q99633 342 aaKnown RBP12.06□□□□□ -0.48
SDF4-203ENST00000403997 TM9SF2Q99805 663 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 YIPF4Q9BSR8 244 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 PTGES2Q9H7Z7 377 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 ZNF395Q9H8N7 513 aaPredicted RBP12.06□□□□□ -0.48
SDF4-203ENST00000403997 KCNK9Q9NPC2 374 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 EIF3LQ9Y262 564 aaKnown RBP12.06□□□□□ -0.48
SDF4-203ENST00000403997 L3MBTL1Q9Y468 752 aa12.06□□□□□ -0.48
SDF4-203ENST00000403997 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 EEF1E1-BLOC1S5C9J1V9 151 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 TM9SF1O15321 606 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 BIRC5O15392 142 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 EEF1E1O43324 174 aaKnown RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 GMFGO60234 142 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 ZWINTO95229 277 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 ANGPTL1O95841 491 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 IL18BPO95998 194 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 TUBBP07437 444 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 PEPDP12955 493 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 ZNF708P17019 499 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 PRIM2P49643 509 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 CLDN18P56856 261 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 ABCE1P61221 599 aaKnown RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 PRR5P85299 388 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 C17orf67Q0P5P2 114 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 GANABQ14697 944 aaKnown RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 PTGR1Q14914 329 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 MLC1Q15049 377 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 BCL2A1Q16548 175 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 DUSP5Q16690 384 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 RAET1LQ5VY80 246 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms