RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FRKP42685 505 aaPredicted RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 RFX3P48380 749 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 SORDQ00796 357 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 GANABQ14697 944 aaKnown RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 GALNTL6Q49A17 601 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 ARL13AQ5H913 290 aaPredicted RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 RAET1LQ5VY80 246 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 ZCCHC23Q6ZST2 131 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 DDIASQ8IXT1 998 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 ZFP28Q8NHY6 868 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 AENQ8WTP8 325 aaKnown RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 FAM222BQ8WU58 562 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 HOXB13Q92826 284 aaPredicted RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 WNT2BQ93097 391 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 ZBED6CLQ96FA7 236 aaPredicted RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 RMND5BQ96G75 393 aaPredicted RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 CLEC4MQ9H2X3 399 aaPredicted RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 DSN1Q9H410 356 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 REEP4Q9H6H4 257 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 FAM221AA4D161 298 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 TTC36A6NLP5 189 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 A6NNC1 897 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 SPAG7O75391 227 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 RCBTB2O95199 551 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 UTS2O95399 124 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 IGKV1D-16P01601 117 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 ARRB2P32121 409 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 MAP3K8P41279 467 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 PSMD4P55036 377 aaKnown RBP13.9□□□□□ -0.18
TPM1-207ENST00000403994 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 UGT3A2Q3SY77 523 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 XKR7Q5GH72 579 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 GRAMD2AQ8IUY3 354 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 FBXO30Q8TB52 745 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 AGR3Q8TD06 166 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 TCP10LQ8TDR4 215 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 PIK3R3Q92569 461 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 INTS12Q96CB8 462 aaKnown RBP13.9□□□□□ -0.18
TPM1-207ENST00000403994 GIMAP5Q96F15 307 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 POLDIP3Q9BY77 421 aaKnown RBP13.9□□□□□ -0.18
TPM1-207ENST00000403994 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 RASSF1Q9NS23 344 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 MED11Q9P086 117 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 NTMQ9P121 344 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 GIMAP2Q9UG22 337 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 BAIAP2L1Q9UHR4 511 aa13.9□□□□□ -0.18
TPM1-207ENST00000403994 MRTO4Q9UKD2 239 aaKnown RBP13.9□□□□□ -0.18
TPM1-207ENST00000403994 PRRC2AP48634 2157 aaKnown RBP13.89□□□□□ -0.19
TPM1-207ENST00000403994 SCAMP2O15127 329 aaKnown RBP13.89□□□□□ -0.19
TPM1-207ENST00000403994 KCNH1O95259 989 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 FGF4P08620 206 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 ACP2P11117 423 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 PRPS2P11908 318 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 BCKDHAP12694 445 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 HK1P19367 917 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 EFNA1P20827 205 aaPredicted RBP13.89□□□□□ -0.19
TPM1-207ENST00000403994 GABRA3P34903 492 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 ASMTP46597 345 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 GRAMD1BQ3KR37 738 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 GALNT10Q86SR1 603 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 MARCH3Q86UD3 253 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 KIF18BQ86Y91 864 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 UBQLNLQ8IYU4 475 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 CDRT4Q8N9R6 151 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 GPR151Q8TDV0 419 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 C1GALT1C1Q96EU7 318 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 TBL1XR1Q9BZK7 514 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 C3orf14Q9HBI5 128 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 EML4Q9HC35 981 aaKnown RBP13.89□□□□□ -0.19
TPM1-207ENST00000403994 ACSS1Q9NUB1 689 aaPredicted RBP13.89□□□□□ -0.19
TPM1-207ENST00000403994 GALNT8Q9NY28 637 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 SH3BP4Q9P0V3 963 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 TRAF6Q9Y4K3 522 aa13.89□□□□□ -0.19
TPM1-207ENST00000403994 NIPBLQ6KC79 2804 aaeCLIP13.88□□□□□ -0.19
TPM1-207ENST00000403994 IGLV3-32A0A0A0MS00 114 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 A0A1W2PNV4 684 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 TUBAL3A6NHL2 446 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 NKX2-2O95096 273 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 TGM6O95932 706 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 CREB1P16220 341 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 SERPINB5P36952 375 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 HPCAL1P37235 193 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 ART1P52961 327 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 MANFP55145 182 aaKnown RBP13.88□□□□□ -0.19
TPM1-207ENST00000403994 PRR5P85299 388 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 MFSD12Q6NUT3 480 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 APOOLQ6UXV4 268 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 LUZP2Q86TE4 346 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 NUP43Q8NFH3 380 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 SLC9A6Q92581 669 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 CAVIN3Q969G5 261 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 MTERF3Q96E29 417 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 RBM24Q9BX46 236 aaKnown RBP13.88□□□□□ -0.19
TPM1-207ENST00000403994 PTGES2Q9H7Z7 377 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms