RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TEX12Q9BXU0 123 aa16.68■□□□□ 0.26
CHTOP-205ENST00000403433 NXF2Q9GZY0 626 aaKnown RBP16.68■□□□□ 0.26
CHTOP-205ENST00000403433 SEMA6CQ9H3T2 930 aa16.68■□□□□ 0.26
CHTOP-205ENST00000403433 DUSP22Q9NRW4 184 aa16.68■□□□□ 0.26
CHTOP-205ENST00000403433 STARD5Q9NSY2 213 aa16.68■□□□□ 0.26
CHTOP-205ENST00000403433 SATB2Q9UPW6 733 aa16.68■□□□□ 0.26
CHTOP-205ENST00000403433 B4DGG1 531 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 NTN1O95631 604 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 DBIP07108 87 aaKnown RBP16.67■□□□□ 0.26
CHTOP-205ENST00000403433 PSMD7P51665 324 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 RAB38P57729 211 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 RPS3AP61247 264 aaKnown RBP16.67■□□□□ 0.26
CHTOP-205ENST00000403433 EFNB1P98172 346 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 MAP4K2Q12851 820 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 DOC2BQ14184 412 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 KLHL22Q53GT1 634 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 ZCCHC12Q6PEW1 402 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 MBOAT2Q6ZWT7 520 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 MRGPREQ86SM8 312 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 TDHQ8IZJ6 230 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 OR9Q1Q8NGQ5 310 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 KLHDC7BQ96G42 594 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 HHATLQ9HCP6 504 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 POMT2Q9UKY4 750 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 CFL2Q9Y281 166 aa16.67■□□□□ 0.26
CHTOP-205ENST00000403433 A0A1W2PPC4 97 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 SGK494L7N484 410 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 PRODHO43272 600 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 MYL12AP19105 171 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 S100A5P33763 92 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 GPR4P46093 362 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 PRICKLE4Q2TBC4 344 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 CLEC12AQ5QGZ9 265 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 EXOSC6Q5RKV6 272 aaKnown RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 TUBA3EQ6PEY2 450 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 ZNF438Q7Z4V0 828 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 NRMQ8IXM6 262 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 GPR151Q8TDV0 419 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 PIK3R3Q92569 461 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 FGF11Q92914 225 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 MROQ9BYG7 248 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 POLR2J2Q9GZM3 115 aaKnown RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 WSB2Q9NYS7 404 aaPredicted RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 MAT2BQ9NZL9 334 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 TESQ9UGI8 421 aaKnown RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 SLC7A7Q9UM01 511 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 BRWD1Q9NSI6 2320 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 CENPVL1A0A0U1RR11 272 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 RDH16O75452 317 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 AK1P00568 194 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 HNRNPCP07910 306 aaKnown RBP eCLIP16.66■□□□□ 0.261e-12■■■■□ 20.4
CHTOP-205ENST00000403433 IFI6P09912 130 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 GNSP15586 552 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 ST6GAL1P15907 406 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 ENDOUP21128 410 aaKnown RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 RPS4Y1P22090 263 aaKnown RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 CD40LGP29965 261 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 PPP5CP53041 499 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 MLLT11Q13015 90 aaPredicted RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 DEFB110Q30KQ9 67 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 NIPAL1Q6NVV3 410 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 MINDY2Q8NBR6 621 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 TMEM255BQ8WV15 326 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 RNFT2Q96EX2 444 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 CDADC1Q9BWV3 514 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 EXOSC4Q9NPD3 245 aaKnown RBP16.66■□□□□ 0.26
CHTOP-205ENST00000403433 NLGN3Q9NZ94 848 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 SEC14L4Q9UDX3 406 aa16.66■□□□□ 0.26
CHTOP-205ENST00000403433 TAF4O00268 1085 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 PIP5K1CO60331 668 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 GPX5O75715 221 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 THY1P04216 161 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 CDH3P22223 829 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 RAB40BQ12829 278 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 EXOSC7Q15024 291 aaKnown RBP16.65■□□□□ 0.26
CHTOP-205ENST00000403433 OXA1LQ15070 435 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 MINDY4Q4G0A6 757 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 C3orf38Q5JPI3 329 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 SNX29P2Q8IUI4 249 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 GALNT12Q8IXK2 581 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 SHISA5Q8N114 240 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 C19orf47Q8N9M1 422 aaKnown RBP16.65■□□□□ 0.26
CHTOP-205ENST00000403433 LRRC61Q9BV99 259 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 NDUFB11Q9NX14 153 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 CHCHD3Q9NX63 227 aaKnown RBP16.65■□□□□ 0.26
CHTOP-205ENST00000403433 GPR52Q9Y2T5 361 aa16.65■□□□□ 0.26
CHTOP-205ENST00000403433 KDM4EB2RXH2 506 aaPredicted RBP16.64■□□□□ 0.26
CHTOP-205ENST00000403433 OR10H2O60403 315 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 HBQ1P09105 142 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 NID1P14543 1247 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 PSMA1P25786 263 aaKnown RBP16.64■□□□□ 0.26
CHTOP-205ENST00000403433 ZNF136P52737 540 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 ZNF155Q12901 538 aaPredicted RBP16.64■□□□□ 0.26
CHTOP-205ENST00000403433 MRPL2Q5T653 305 aaKnown RBP16.64■□□□□ 0.26
CHTOP-205ENST00000403433 PAQR6Q6TCH4 344 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 ZNF620Q6ZNG0 422 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 GDPGP1Q6ZNW5 385 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 SYT13Q7L8C5 426 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 FAM60AQ9NP50 221 aa16.64■□□□□ 0.26
CHTOP-205ENST00000403433 MRPS18AQ9NVS2 196 aaKnown RBP16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms