RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TSTQ16762 297 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TRMT12Q53H54 448 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GDF7Q7Z4P5 450 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 SLC43A2Q8N370 569 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 COX18Q8N8Q8 333 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 C7orf57Q8NEG2 295 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TCTN2Q96GX1 697 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GPA33Q99795 319 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 PHF7Q9BWX1 381 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GPR174Q9BXC1 333 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZBTB20Q9HC78 741 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 MAT2BQ9NZL9 334 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CRNNQ9UBG3 495 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TMEM5Q9Y2B1 443 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GPR55Q9Y2T6 319 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 KDM4EB2RXH2 506 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 FGF17O60258 216 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 NKX2-2O95096 273 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 IGFBP1P08833 259 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CHRNB1P11230 501 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 BMP4P12644 408 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 POU6F2P78424 691 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 MGAT2Q10469 447 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 FAM53BQ14153 422 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 PRTGQ2VWP7 1150 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GARNL3Q5VVW2 1013 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF836Q6ZNA1 936 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OLIG3Q7RTU3 272 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OR4N5Q8IXE1 308 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 HS6ST2Q96MM7 605 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OPALINQ96PE5 141 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OR51E2Q9H255 320 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 NDUFB11Q9NX14 153 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 KLHL3Q9UH77 587 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 BRINP1O60477 761 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TRHRP34981 398 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 SOX18P35713 384 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ETV6P41212 452 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 VSX2P58304 361 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TFF2Q03403 129 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OXA1LQ15070 435 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNHIT3Q15649 155 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TRIM16LQ309B1 348 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF613Q6PF04 617 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GKN2Q86XP6 184 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 KIF18BQ86Y91 864 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ARHGEF39Q8N4T4 335 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 C19orf47Q8N9M1 422 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TSTD1Q8NFU3 115 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OR52I1Q8NGK6 324 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 OIT3Q8WWZ8 545 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 PATE1Q8WXA2 126 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ABTB1Q969K4 478 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ANKRD9Q96BM1 317 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 SLC6A18Q96N87 628 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CHCHD6Q9BRQ6 235 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CDADC1Q9BWV3 514 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TCEAL2Q9H3H9 227 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ANKRA2Q9H9E1 313 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ADAP2Q9NPF8 381 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 STUB1Q9UNE7 303 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CDH10Q9Y6N8 788 aa16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GOLGA4Q13439 2230 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ARHGEF17Q96PE2 2063 aaPredicted RBP16.5■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 LOC100506127A0A0U1RQW1 187 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CDHR4A6H8M9 788 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 LILRA5A6NI73 299 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 STK25O00506 426 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 NARSO43776 548 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CSO75390 466 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 SNX4O95219 450 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CSF2P04141 144 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 RNH1P13489 461 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 PVRP15151 417 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CD27P26842 260 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 MTNR1AP48039 350 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF136P52737 540 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 SHC2P98077 582 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 BNC1Q01954 994 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TDGQ13569 410 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 KRR1Q13601 381 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF181Q2M3W8 571 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TMEM31Q5JXX7 168 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF554Q86TJ5 538 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 GRAMD2AQ8IUY3 354 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 MCATQ8IVS2 390 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF595Q8IYB9 648 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CDK20Q8IZL9 346 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ANKK1Q8NFD2 765 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 BRIX1Q8TDN6 353 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZNF559Q9BR84 538 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ORAI3Q9BRQ5 295 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 LMF2Q9BU23 707 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 HHATLQ9HCP6 504 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 SSR3Q9UNL2 185 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CLCA2Q9UQC9 943 aa16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-204ENST00000399084 MRPS2Q9Y399 296 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms