RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LTA4HP09960 611 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 PYGBP11216 843 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 PCSK2P16519 638 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 IL12BP29460 328 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 EVI2BP34910 448 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 KRT20P35900 424 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 PIK3CGP48736 1102 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 MAPK12P53778 367 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ALDH18A1P54886 795 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 CTBP2P56545 445 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 DUSP2Q05923 314 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF844Q08AG5 666 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 GTF2H2Q13888 395 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 CR1LQ2VPA4 569 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 PGGHGQ32M88 737 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 NCMAPQ5T1S8 102 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 GTF2H2CQ6P1K8 395 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 TBC1D1Q86TI0 1168 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ZBED8Q8IZ13 594 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 CNPY4Q8N129 248 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 METTL4Q8N3J2 472 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 RHEBL1Q8TAI7 183 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ZFAND2BQ8WV99 257 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 FAM168AQ92567 244 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 KLHL29Q96CT2 875 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 MSI2Q96DH6 328 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 C11orf24Q96F05 449 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 CNRIP1Q96F85 164 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 VSTM2LQ96N03 204 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF681Q96N22 645 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 TRAF4Q9BUZ4 470 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 MRPL1Q9BYD6 325 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF696Q9H7X3 374 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ZBTB26Q9HCK0 441 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 SDHAF3Q9NRP4 125 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 GLRX2Q9NS18 164 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 AP4B1Q9Y6B7 739 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 FAM159BA6NKW6 160 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 C17orf51A8MQB3 221 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 TMPRSS2O15393 492 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 FADS1O60427 444 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 ALX3O95076 343 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 CLDN9O95484 217 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 PTNP21246 168 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 CRABP2P29373 138 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 SSTR1P30872 391 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 SPRP35270 261 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-203ENST00000397378 CORO7P57737 925 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 MRPS35P82673 323 aaKnown RBP8.39□□□□□ -1.07
NEDD9-203ENST00000397378 LTB4RQ15722 352 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 SGCBQ16585 318 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 PFKFB4Q16877 469 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEDD9-203ENST00000397378 TMEM44Q2T9K0 475 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 ZNF672Q499Z4 452 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-203ENST00000397378 ZNF628Q5EBL2 1059 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 GRTP1Q5TC63 336 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 FRG2Q64ET8 278 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 GOLGA7Q7Z5G4 137 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 CMC1Q7Z7K0 106 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 GGNQ86UU5 652 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 STK32CQ86UX6 486 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 EXOC3L1Q86VI1 746 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 LRRC17Q8N6Y2 441 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 STEAP2Q8NFT2 490 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 KBTBD8Q8NFY9 601 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 HTRA1Q92743 480 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 C3orf49Q96BT1 292 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 TM4SF18Q96CE8 201 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 NXNL1Q96CM4 212 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 C1GALT1C1Q96EU7 318 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 FRG2BQ96QU4 278 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 HDHD5Q9BXW7 423 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 PTGES2Q9H7Z7 377 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 NGBQ9NPG2 151 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 FAIMQ9NVQ4 179 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 PAQR5Q9NXK6 330 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-203ENST00000397378 MED11Q9P086 117 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 ARMCX1Q9P291 453 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 STOML1Q9UBI4 398 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 ABCG2Q9UNQ0 655 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 B3GALT5Q9Y2C3 310 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 PPP2R2CQ9Y2T4 447 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 TNPO3Q9Y5L0 923 aaKnown RBP8.39□□□□□ -1.07
NEDD9-203ENST00000397378 SNX8Q9Y5X2 465 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 ZNF780BQ9Y6R6 833 aa8.39□□□□□ -1.07
NEDD9-203ENST00000397378 TCRBV9S1A1TA0A576 114 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 TMEM89A2RUT3 159 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 FAM157AC9JC47 383 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 SCO2O43819 266 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 PLGP00747 810 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-203ENST00000397378 TGFAP01135 160 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 CD8AP01732 235 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 FESP07332 822 aa8.38□□□□□ -1.07
NEDD9-203ENST00000397378 APEHP13798 732 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms