RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 HACD2Q6Y1H2 254 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 TMEM64Q6YI46 380 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 RINLQ6ZS11 566 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 ZZZ3Q8IYH5 903 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 SAMD14Q8IZD0 417 aaPredicted RBP9.47□□□□□ -0.89
NEDD8-202ENST00000396828 DPP10Q8N608 796 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 NAXEQ8NCW5 288 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 OR10G3Q8NGC4 313 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 KLHL29Q96CT2 875 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 SGCZQ96LD1 299 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 DGAT2Q96PD7 388 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 LRMDAQ9H2I8 198 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 SLC6A15Q9H2J7 730 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 RPF2Q9H7B2 306 aaKnown RBP9.47□□□□□ -0.89
NEDD8-202ENST00000396828 SLC52A3Q9NQ40 469 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 TAS2R7Q9NYW3 318 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 BTNL2Q9UIR0 455 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 UTS2RQ9UKP6 389 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 ACAD8Q9UKU7 415 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 EXO1Q9UQ84 846 aaKnown RBP9.47□□□□□ -0.89
NEDD8-202ENST00000396828 ZNF780BQ9Y6R6 833 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 ANKHD1Q8IWZ3 2542 aaKnown RBP9.46□□□□□ -0.89
NEDD8-202ENST00000396828 FLNAP21333 2647 aaKnown RBP9.46□□□□□ -0.89
NEDD8-202ENST00000396828 TRGV5A0A0B4J1U4 118 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 RNASET2O00584 256 aaKnown RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 PDPK1O15530 556 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 SUSD5O60279 629 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 ERN1O75460 977 aaKnown RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 NTSP30990 170 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 TRPC1P48995 793 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 NCALDP61601 193 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 C1orf185Q5T7R7 199 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 SLC22A10Q63ZE4 541 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 BICRALQ6AI39 1079 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 OR52E8Q6IFG1 317 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 SLC48A1Q6P1K1 146 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 PGAM4Q8N0Y7 254 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 ARHGAP24Q8N264 748 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 RBM15BQ8NDT2 890 aaKnown RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 OR5L2Q8NGL0 311 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 ZFP28Q8NHY6 868 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 NUBPLQ8TB37 319 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 PAQR8Q8TEZ7 354 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 TANKQ92844 425 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 MCUR1Q96AQ8 359 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 EXOSC8Q96B26 276 aaKnown RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 SLC7A6OSQ96CW6 309 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 SPACA9Q96E40 222 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 ZBED6CLQ96FA7 236 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 FBXL20Q96IG2 436 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 PANX1Q96RD7 426 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 HOPXQ9BPY8 73 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 LDAHQ9H6V9 325 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF703Q9H7S9 590 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 SLC35C2Q9NQQ7 365 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 TAS2R1Q9NYW7 299 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 COPS7AQ9UBW8 275 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 KCNN3Q9UGI6 736 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 ERVK-19Q9WJR5 959 aa9.46□□□□□ -0.9
NEDD8-202ENST00000396828 CHCHD2Q9Y6H1 151 aaPredicted RBP9.46□□□□□ -0.9
NEDD8-202ENST00000396828 A0A096LPI6 279 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 C15orf38-AP3S2A0A0A6YYH1 394 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 A0A1W2PRB8 838 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 RFXANKO14593 260 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ERAL1O75616 437 aaKnown RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 CTAG2O75638 210 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 DNAJC8O75937 253 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 FBXO45P0C2W1 286 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 CT62P0C5K7 136 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 MPIP34949 423 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 MANFP55145 182 aaKnown RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 SLC37A1P57057 533 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 KCNJ2P63252 427 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 SLC25A3Q00325 362 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ZNF267Q14586 743 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 SPRED3Q2MJR0 410 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 PAGE3Q5JUK9 113 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 DESI1Q6ICB0 168 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 POMZP3Q6PJE2 187 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ARSKQ6UWY0 536 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ASRGL1Q7L266 308 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 WDR53Q7Z5U6 358 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ARPINQ7Z6K5 226 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 DHDDSQ86SQ9 333 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 RETREG3Q86VR2 466 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 ULK2Q8IYT8 1036 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 DEFB107AQ8IZN7 70 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 MMP21Q8N119 569 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 LRRC25Q8N386 305 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 FBXW8Q8N3Y1 598 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 TRIML2Q8N7C3 387 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 RELL2Q8NC24 303 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-202ENST00000396828 FAM13CQ8NE31 585 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 C7orf57Q8NEG2 295 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 TNIP2Q8NFZ5 429 aa9.45□□□□□ -0.9
NEDD8-202ENST00000396828 OR4K14Q8NGD5 310 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms