RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SNRPNP63162 240 aaKnown RBP15.04■□□□□ -0
SNX6-202ENST00000396526 C14orf28Q4W4Y0 310 aa15.04■□□□□ -0
SNX6-202ENST00000396526 ZNF836Q6ZNA1 936 aa15.04■□□□□ -0
SNX6-202ENST00000396526 AMER2Q8N7J2 671 aa15.04■□□□□ -0
SNX6-202ENST00000396526 TMEM52Q8NDY8 209 aa15.04■□□□□ -0
SNX6-202ENST00000396526 OR52R1Q8NGF1 315 aa15.04■□□□□ -0
SNX6-202ENST00000396526 DOK4Q8TEW6 326 aa15.04■□□□□ -0
SNX6-202ENST00000396526 PIK3R3Q92569 461 aa15.04■□□□□ -0
SNX6-202ENST00000396526 TSSK6Q9BXA6 273 aa15.04■□□□□ -0
SNX6-202ENST00000396526 SAP130Q9H0E3 1048 aa15.04■□□□□ -0
SNX6-202ENST00000396526 GPR55Q9Y2T6 319 aaPredicted RBP15.04■□□□□ -0
SNX6-202ENST00000396526 SLCO1B1Q9Y6L6 691 aa15.04■□□□□ -0
SNX6-202ENST00000396526 TTC36A6NLP5 189 aa15.03■□□□□ -0
SNX6-202ENST00000396526 HMGN1P05114 100 aa15.03■□□□□ -0
SNX6-202ENST00000396526 ZNF846Q147U1 533 aa15.03■□□□□ -0
SNX6-202ENST00000396526 DEFB133Q30KQ1 61 aa15.03■□□□□ -0
SNX6-202ENST00000396526 COL13A1Q5TAT6 717 aaPredicted RBP15.03■□□□□ -0
SNX6-202ENST00000396526 SIX5Q8N196 739 aa15.03■□□□□ -0
SNX6-202ENST00000396526 ZNF614Q8N883 585 aa15.03■□□□□ -0
SNX6-202ENST00000396526 MMABQ96EY8 250 aaPredicted RBP15.03■□□□□ -0
SNX6-202ENST00000396526 ZNF578Q96N58 590 aaPredicted RBP15.03■□□□□ -0
SNX6-202ENST00000396526 MGLLQ99685 303 aa15.03■□□□□ -0
SNX6-202ENST00000396526 ALOXE3Q9BYJ1 711 aa15.03■□□□□ -0
SNX6-202ENST00000396526 WDR12Q9GZL7 423 aaKnown RBP15.03■□□□□ -0
SNX6-202ENST00000396526 SLC25A19Q9HC21 320 aa15.03■□□□□ -0
SNX6-202ENST00000396526 H2AFY2Q9P0M6 372 aaPredicted RBP15.03■□□□□ -0
SNX6-202ENST00000396526 A0A1W2PPC1 479 aa15.03■□□□□ -0
SNX6-202ENST00000396526 MYL12BO14950 172 aa15.03■□□□□ -0
SNX6-202ENST00000396526 DYRK3O43781 588 aa15.03■□□□□ -0
SNX6-202ENST00000396526 MYL12AP19105 171 aa15.03■□□□□ -0
SNX6-202ENST00000396526 FPR3P25089 353 aa15.03■□□□□ -0
SNX6-202ENST00000396526 NXPH1P58417 271 aa15.03■□□□□ -0
SNX6-202ENST00000396526 FIGNL1Q6PIW4 674 aa15.03■□□□□ -0
SNX6-202ENST00000396526 MBOAT2Q6ZWT7 520 aa15.03■□□□□ -0
SNX6-202ENST00000396526 USP43Q70EL4 1123 aa15.03■□□□□ -0
SNX6-202ENST00000396526 GDF7Q7Z4P5 450 aa15.03■□□□□ -0
SNX6-202ENST00000396526 RFKQ969G6 155 aa15.03■□□□□ -0
SNX6-202ENST00000396526 CTHRC1Q96CG8 243 aa15.03■□□□□ -0
SNX6-202ENST00000396526 PRR14Q9BWN1 585 aa15.03■□□□□ -0
SNX6-202ENST00000396526 CLDN25C9JDP6 229 aa15.02■□□□□ -0
SNX6-202ENST00000396526 NKX2-2O95096 273 aa15.02■□□□□ -0
SNX6-202ENST00000396526 IFNA16P05015 189 aa15.02■□□□□ -0
SNX6-202ENST00000396526 IGFBP1P08833 259 aaPredicted RBP15.02■□□□□ -0
SNX6-202ENST00000396526 EPHA4P54764 986 aa15.02■□□□□ -0
SNX6-202ENST00000396526 CDK5Q00535 292 aa15.02■□□□□ -0
SNX6-202ENST00000396526 FLYWCH1Q4VC44 716 aa15.02■□□□□ -0
SNX6-202ENST00000396526 SLC25A30Q5SVS4 291 aa15.02■□□□□ -0
SNX6-202ENST00000396526 PRICKLE2Q7Z3G6 844 aa15.02■□□□□ -0
SNX6-202ENST00000396526 SLC46A3Q7Z3Q1 461 aa15.02■□□□□ -0
SNX6-202ENST00000396526 RNF113BQ8IZP6 322 aaKnown RBP15.02■□□□□ -0
SNX6-202ENST00000396526 IQCF1Q8N6M8 205 aa15.02■□□□□ -0
SNX6-202ENST00000396526 FAM46AQ96IP4 442 aaKnown RBP15.02■□□□□ -0
SNX6-202ENST00000396526 LRR1Q96L50 414 aa15.02■□□□□ -0
SNX6-202ENST00000396526 MND1Q9BWT6 205 aa15.02■□□□□ -0
SNX6-202ENST00000396526 Q9N2J8 555 aa15.02■□□□□ -0
SNX6-202ENST00000396526 KRBA1A5PL33 1030 aa15.02■□□□□ -0
SNX6-202ENST00000396526 FOXD2O60548 495 aaPredicted RBP15.02■□□□□ -0
SNX6-202ENST00000396526 FMO6PO60774 539 aa15.02■□□□□ -0
SNX6-202ENST00000396526 LIPAP38571 399 aa15.02■□□□□ -0
SNX6-202ENST00000396526 BMXP51813 675 aa15.02■□□□□ -0
SNX6-202ENST00000396526 PSMD4P55036 377 aaKnown RBP15.02■□□□□ -0
SNX6-202ENST00000396526 HOXC5Q00444 222 aa15.02■□□□□ -0
SNX6-202ENST00000396526 RHAGQ02094 409 aa15.02■□□□□ -0
SNX6-202ENST00000396526 SERTAD2Q14140 314 aa15.02■□□□□ -0
SNX6-202ENST00000396526 NRMQ8IXM6 262 aa15.02■□□□□ -0
SNX6-202ENST00000396526 C7orf57Q8NEG2 295 aa15.02■□□□□ -0
SNX6-202ENST00000396526 DCSTAMPQ9H295 470 aa15.02■□□□□ -0
SNX6-202ENST00000396526 TMEM74BQ9NUR3 256 aa15.02■□□□□ -0
SNX6-202ENST00000396526 KIAA0513O60268 411 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 PTHP01270 115 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 BMP7P18075 431 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 CXCL12P48061 93 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 RGS6P49758 472 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 NCS1P62166 190 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 EEF1A1P68104 462 aaKnown RBP15.02□□□□□ -0.01
SNX6-202ENST00000396526 ZNF91Q05481 1191 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 IRF3Q14653 427 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 MRPL2Q5T653 305 aaKnown RBP15.02□□□□□ -0.01
SNX6-202ENST00000396526 OGFOD3Q6PK18 319 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 RBCK1Q9BYM8 510 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 CHRNA10Q9GZZ6 450 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 CHRDQ9H2X0 955 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 PRO3102Q9H379 93 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 TESQ9UGI8 421 aaKnown RBP15.02□□□□□ -0.01
SNX6-202ENST00000396526 TMEM5Q9Y2B1 443 aa15.02□□□□□ -0.01
SNX6-202ENST00000396526 LRP4O75096 1905 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 CCRL2O00421 344 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 PRAMEF2O60811 474 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 TRHRP34981 398 aaPredicted RBP15.01□□□□□ -0.01
SNX6-202ENST00000396526 HSD17B7P56937 341 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 MLLT1Q03111 559 aaPredicted RBP15.01□□□□□ -0.01
SNX6-202ENST00000396526 ZNF267Q14586 743 aaPredicted RBP15.01□□□□□ -0.01
SNX6-202ENST00000396526 ARHGAP22Q7Z5H3 698 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 OR52L1Q8NGH7 329 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 ZNF559Q9BR84 538 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 G6PC3Q9BUM1 346 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 YIPF2Q9BWQ6 316 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.01□□□□□ -0.01
SNX6-202ENST00000396526 CNIH4Q9P003 139 aa15.01□□□□□ -0.01
SNX6-202ENST00000396526 SLC7A7Q9UM01 511 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms