RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 HOXC5Q00444 222 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 IFITM3Q01628 133 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 ZNF542PQ5EBM4 170 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 TUBA3EQ6PEY2 450 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 RRM2BQ7LG56 351 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 GDF7Q7Z4P5 450 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 TAF8Q7Z7C8 310 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 ZNF554Q86TJ5 538 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 OOSP2Q86WS3 158 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 MEX3DQ86XN8 651 aaKnown RBP17.35■□□□□ 0.37
SIL1-202ENST00000394817 NKAIN4Q8IVV8 208 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 CACTIN-AS1Q8N1I8 211 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 OR52I1Q8NGK6 324 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 SLC41A3Q96GZ6 507 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 SAP130Q9H0E3 1048 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 DUSP22Q9NRW4 184 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 MRPS18AQ9NVS2 196 aaKnown RBP17.35■□□□□ 0.37
SIL1-202ENST00000394817 DAPK2Q9UIK4 370 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 NTNG1Q9Y2I2 539 aa17.35■□□□□ 0.37
SIL1-202ENST00000394817 KIAA0513O60268 411 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 HBQ1P09105 142 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 THEGLP0DJG4 465 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 PPP1CAP62136 330 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 NIPAL1Q6NVV3 410 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 SLC36A4Q6YBV0 504 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 RBM12BQ8IXT5 1001 aaKnown RBP17.34■□□□□ 0.37
SIL1-202ENST00000394817 CA13Q8N1Q1 262 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 ZNF619Q8N2I2 560 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 MINDY2Q8NBR6 621 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 OR5T3Q8NGG3 340 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 STACQ99469 402 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 PRRG3Q9BZD7 231 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 ADAP2Q9NPF8 381 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 CFL2Q9Y281 166 aa17.34■□□□□ 0.37
SIL1-202ENST00000394817 TAF4O00268 1085 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 PRODHO43272 600 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 KLF4O43474 513 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 NTN1O95631 604 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 ALOX5P09917 674 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 ZNF136P52737 540 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 HHEXQ03014 270 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 MLLT11Q13015 90 aaPredicted RBP17.33■□□□□ 0.37
SIL1-202ENST00000394817 C1DQ13901 141 aaKnown RBP17.33■□□□□ 0.37
SIL1-202ENST00000394817 PRICKLE4Q2TBC4 344 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 TRIM16LQ309B1 348 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 DCST2Q5T1A1 773 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 ZCCHC12Q6PEW1 402 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 MBOAT2Q6ZWT7 520 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 SYT13Q7L8C5 426 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 CYP4Z2PQ8N1L4 340 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 CDRT4Q8N9R6 151 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 GUCD1Q96NT3 240 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 SLC38A2Q96QD8 506 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 C6orf62Q9GZU0 229 aaPredicted RBP17.33■□□□□ 0.37
SIL1-202ENST00000394817 MAT2BQ9NZL9 334 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 POMT2Q9UKY4 750 aa17.33■□□□□ 0.37
SIL1-202ENST00000394817 CENPVL1A0A0U1RR11 272 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 IRGMA1A4Y4 181 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 KRBA1A5PL33 1030 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 MYL12BO14950 172 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 GPX5O75715 221 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 NT5EP21589 574 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 NUDT1P36639 197 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 SOX3P41225 446 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 STAT5AP42229 794 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 GAS1P54826 345 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 VSX2P58304 361 aaPredicted RBP17.33■□□□□ 0.36
SIL1-202ENST00000394817 RPS3AP61247 264 aaKnown RBP17.33■□□□□ 0.36
SIL1-202ENST00000394817 PERM1Q5SV97 790 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 CCNJQ5T5M9 372 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 GDPGP1Q6ZNW5 385 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 SHISA5Q8N114 240 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 FAM160A2Q8N612 972 aaPredicted RBP17.33■□□□□ 0.36
SIL1-202ENST00000394817 POGLUT1Q8NBL1 392 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 RLN3Q8WXF3 142 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 TPSD1Q9BZJ3 242 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 FOXQ1Q9C009 403 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 POLR2J2Q9GZM3 115 aaKnown RBP17.33■□□□□ 0.36
SIL1-202ENST00000394817 NDUFB11Q9NX14 153 aa17.33■□□□□ 0.36
SIL1-202ENST00000394817 FUOMA2VDF0 154 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 SNTNA6NMZ2 147 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 KDM4EB2RXH2 506 aaPredicted RBP17.32■□□□□ 0.36
SIL1-202ENST00000394817 STX11O75558 287 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 DBIP07108 87 aaKnown RBP17.32■□□□□ 0.36
SIL1-202ENST00000394817 CTSEP14091 401 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 MAP3K8P41279 467 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 MGAT2Q10469 447 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 RAB40BQ12829 278 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 FZD5Q13467 585 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 UBXN2BQ14CS0 331 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 GPR68Q15743 365 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 KLHL22Q53GT1 634 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 C3orf38Q5JPI3 329 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 ZNF761Q86XN6 746 aaPredicted RBP17.32■□□□□ 0.36
SIL1-202ENST00000394817 SNX29P2Q8IUI4 249 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 SNRNP27Q8WVK2 155 aaKnown RBP17.32■□□□□ 0.36
SIL1-202ENST00000394817 OSTF1Q92882 214 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 CCDC3Q9BQI4 270 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 GPR174Q9BXC1 333 aa17.32■□□□□ 0.36
SIL1-202ENST00000394817 SEMA6CQ9H3T2 930 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms