RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 DTX4Q9Y2E6 619 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 TOXO94900 526 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 ALDOBP05062 364 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 KIAA1024LP59773 190 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 RAP2BP61225 183 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 GANABQ14697 944 aaKnown RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 GOT1L1Q8NHS2 421 aaPredicted RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 LMLNQ96KR4 655 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 ZDHHC6Q9H6R6 413 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 RPS6KB2Q9UBS0 482 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 SEC14L3Q9UDX4 400 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 CA5BQ9Y2D0 317 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 ANXA2P2A6NMY6 339 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 GALR3O60755 368 aaPredicted RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 EFCAB14O75071 495 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 JUPP14923 745 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 PPP3CBP16298 524 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 PCBP3P57721 371 aaKnown RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 POLR2LP62875 67 aaKnown RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 DYRK1AQ13627 763 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF630Q2M218 657 aaPredicted RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 TRMT11Q7Z4G4 463 aaKnown RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 SLC30A8Q8IWU4 369 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 CMTM8Q8IZV2 173 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 C7orf57Q8NEG2 295 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 OR52N2Q8NGI0 321 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 OR5M9Q8NGP3 310 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 CNOT9Q92600 299 aaKnown RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 SLC25A13Q9UJS0 675 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 GRM6O15303 877 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 CHST10O43529 356 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 HPP00738 406 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 TFP02787 698 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 EIF4EP06730 217 aaKnown RBP17.7■□□□□ 0.42
HOXC6-202ENST00000394331 CPN1P15169 458 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 LAG3P18627 525 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 S100A11P31949 105 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 PUM1Q14671 1186 aaKnown RBP eCLIP17.7■□□□□ 0.42
HOXC6-202ENST00000394331 CNKSR3Q6P9H4 555 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 BCDIN3DQ7Z5W3 292 aaKnown RBP17.7■□□□□ 0.42
HOXC6-202ENST00000394331 TMEM151BQ8IW70 566 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 ZDHHC1Q8WTX9 485 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 B4GALT6Q9UBX8 382 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 CHST2Q9Y4C5 530 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 TRBV4-1A0A0J9YWV2 114 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 H3BN98 237 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 LRRTM2O43300 516 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 TLX2O43763 284 aaPredicted RBP17.7■□□□□ 0.42
HOXC6-202ENST00000394331 SSX5O60225 188 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 RECKO95980 971 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 SMIM6P0DI80 62 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 GABRA1P14867 456 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 MMP15P51511 669 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 SMSP52788 366 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 MAZP56270 477 aaKnown RBP17.7■□□□□ 0.42
HOXC6-202ENST00000394331 CHIT1Q13231 466 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 ZNF528Q3MIS6 628 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 CD300LDQ6UXZ3 194 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 VRK3Q8IV63 474 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 BMPERQ8N8U9 685 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 PIPOXQ9P0Z9 390 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 RUVBL1Q9Y265 456 aaKnown RBP17.7■□□□□ 0.42
HOXC6-202ENST00000394331 SCN5AQ14524 2016 aa17.7■□□□□ 0.42
HOXC6-202ENST00000394331 NUP214P35658 2090 aaPredicted RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 HMSDA8MTL9 139 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 LEFTY2O00292 366 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 RNASET2O00584 256 aaKnown RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 PRODHO43272 600 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 UGDHO60701 494 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 AQP8O94778 261 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SOX14O95416 240 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 LIMS3P0CW19 117 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 LIMS4P0CW20 117 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 POU3F2P20265 443 aaPredicted RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SRP9P49458 86 aaKnown RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 GK2Q14410 553 aaPredicted RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 UBXN2BQ14CS0 331 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 METTL11BQ5VVY1 283 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 LIPJQ5W064 366 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SLC30A6Q6NXT4 461 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SIAH3Q8IW03 269 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 OXR1Q8N573 874 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 ZNF527Q8NB42 609 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 TEFMQ96QE5 360 aaKnown RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 ABHD1Q96SE0 405 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 POLR2J3Q9H1A7 115 aaKnown RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 GPATCH2Q9NW75 528 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 A0A1B0GUH1 482 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 TRBC2A0A5B9 178 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 HPXP02790 462 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 FABP1P07148 127 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SRPRAP08240 638 aaKnown RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 ATP5A1P25705 553 aaKnown RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 CRATP43155 626 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 ASMTP46597 345 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 CPTPQ5TA50 214 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SAMD14Q8IZD0 417 aaPredicted RBP17.69■□□□□ 0.42
HOXC6-202ENST00000394331 NFKBIDQ8NI38 313 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 TEX47Q8TBZ9 253 aa17.69■□□□□ 0.42
HOXC6-202ENST00000394331 SLC5A11Q8WWX8 675 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms