RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 SULT1B1O43704 296 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 RAB36O95755 333 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CFDP00746 253 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 IFNA14P01570 189 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 HIST1H2AGP0C0S8 130 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 HIST1H2ADP20671 130 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 KELP23276 732 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 AOAHP28039 575 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 GABRA5P31644 462 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 GSTM5P46439 218 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ZNF81P51508 661 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 MVDP53602 400 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CAV3P56539 151 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CTBP2P56545 445 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 WNT4P56705 351 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 PPP2CBP62714 309 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 RPS25P62851 125 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 PPP2CAP67775 309 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SCRN3Q0VDG4 424 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 LRRC32Q14392 662 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 HSD17B12Q53GQ0 312 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SLC25A30Q5SVS4 291 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ZNF776Q68DI1 518 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 NXPE1Q8N323 547 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 OR52I1Q8NGK6 324 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 PCNPQ8WW12 178 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 SLC9A6Q92581 669 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 RIT1Q92963 219 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 NXPE2Q96DL1 559 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 HIST1H2AHQ96KK5 128 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 HIST1H2AJQ99878 128 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 H2AFJQ9BTM1 129 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 C11orf16Q9NQ32 467 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 DNAJC11Q9NVH1 559 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 VPS29Q9UBQ0 182 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 FAM8A1Q9UBU6 413 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 WNT16Q9UBV4 365 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 KCND3Q9UK17 655 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ACSL5Q9ULC5 683 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 YARS2Q9Y2Z4 477 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 PCYT1BQ9Y5K3 369 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 KLF2Q9Y5W3 355 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 MFSD2BA6NFX1 497 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CASKO14936 926 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 NPC1O15118 1278 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SCAMP2O15127 329 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 CASC3O15234 703 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 SLC19A2O60779 497 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ADAM11O75078 769 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 DCNP07585 359 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 NR2F6P10588 404 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CXCL3P19876 107 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 C5AR1P21730 350 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 MAT2AP31153 395 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 NUP62P37198 522 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 ETV5P41161 510 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ADPRHP54922 357 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 AP1S2P56377 157 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 STARD6P59095 220 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 FABP5Q01469 135 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 HEPACAMQ14CZ8 416 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SPIN4Q56A73 249 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CRB2Q5IJ48 1285 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CASP12Q6UXS9 341 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 CEACAM20Q6UY09 585 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 ZNF704Q6ZNC4 412 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 UBE2R2Q712K3 238 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 OVCH2Q7RTZ1 564 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 TAGAPQ8N103 731 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 FAM26EQ8N5C1 309 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 OR6C4Q8NGE1 309 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 OR6M1Q8NGM8 313 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 OR14C36Q8NHC7 312 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 GOT1L1Q8NHS2 421 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 CXorf40BQ96DE9 158 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 C11orf24Q96F05 449 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 DTD2Q96FN9 168 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SIPA1Q96FS4 1042 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 PPP1R16AQ96I34 528 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 LINC00052Q96N35 136 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 EBPLQ9BY08 206 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 OR51J1Q9H342 316 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SLC35C2Q9NQQ7 365 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 MBNL1Q9NR56 388 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 GPATCH2Q9NW75 528 aa10.45□□□□□ -0.74
CUX1-204ENST00000393824 SPATA6Q9NWH7 488 aaPredicted RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 EXO1Q9UQ84 846 aaKnown RBP10.45□□□□□ -0.74
CUX1-204ENST00000393824 TMEM129A0AVI4 362 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 PIPSLA2A3N6 862 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 KRBOX1C9JBD0 128 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 PCDH8O95206 1070 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 LALBAP00709 142 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 F8A1P23610 371 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 BTCP35070 178 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 FEN1P39748 380 aaKnown RBP10.44□□□□□ -0.74
CUX1-204ENST00000393824 AVPR1BP47901 424 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 GAB1Q13480 694 aa10.44□□□□□ -0.74
CUX1-204ENST00000393824 CPTPQ5TA50 214 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms