RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 SLC35E2P0CK97 266 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 MLNP12872 115 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 ZNF708P17019 499 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 USF1P22415 310 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 PIK3R1P27986 724 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 ABCD3P28288 659 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 STARP49675 285 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 LHX2P50458 406 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 ACTG1P63261 375 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 SRSF3P84103 164 aaKnown RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 PLCXD2Q0VAA5 305 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 KIF5AQ12840 1032 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 SLMAPQ14BN4 828 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 CYP1B1Q16678 543 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 ADPRMQ3LIE5 342 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 FAM120AOSQ5T036 256 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 ETV3LQ6ZN32 361 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 MEX3DQ86XN8 651 aaKnown RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 VSTM4Q8IW00 320 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 C17orf47Q8NEP4 570 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 TRIM58Q8NG06 486 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 OR7G1Q8NGA0 311 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 IGFBPL1Q8WX77 278 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 HSD17B8Q92506 261 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 PROX1Q92786 737 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 RGMAQ96B86 450 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 FOXRED1Q96CU9 486 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 PTCD3Q96EY7 689 aaKnown RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 C11orf24Q96F05 449 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 CMTM7Q96FZ5 175 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 RADILQ96JH8 1075 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 MARK4Q96L34 752 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 NDNQ99608 321 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 MAPKAP1Q9BPZ7 522 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 TMEM204Q9BSN7 226 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 PINK1Q9BXM7 581 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 PTGES2Q9H7Z7 377 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 GCM1Q9NP62 436 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 SDHAF3Q9NRP4 125 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 GLRX2Q9NS18 164 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 PAQR5Q9NXK6 330 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 CISD1Q9NZ45 108 aaKnown RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 CORO1CQ9ULV4 474 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 VWA7Q9Y334 891 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 MAGED1Q9Y5V3 778 aaPredicted RBP7.05□□□□□ -1.28
CASP4-201ENST00000393150 WIF1Q9Y5W5 379 aa7.05□□□□□ -1.28
CASP4-201ENST00000393150 GRID2IPA4D2P6 1211 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 EFCAB8A8MWE9 144 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 C4orf51C9J302 202 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 DYNC1I1O14576 645 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 HCRTR2O43614 444 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 SYNGR4O95473 234 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 TTC4O95801 387 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 S100BP04271 92 aaPredicted RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 SOD3P08294 240 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PCNAP12004 261 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 NT5EP21589 574 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PCMT1P22061 227 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 CLK3P49761 638 aaKnown RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 PSPHP78330 225 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 IGLV3-21P80748 117 aaPredicted RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 CDKL1Q00532 357 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 IRF8Q02556 426 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 DBPQ10586 325 aaPredicted RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 EFR3AQ14156 821 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 CCNG2Q16589 344 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 DEPDC1Q5TB30 811 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 FNDC7Q5VTL7 733 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 RAET1LQ5VY80 246 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 CD276Q5ZPR3 534 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 OR4C11Q6IEV9 310 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 TMEM81Q6P7N7 255 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 SBSNQ6UWP8 590 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 ADAMTSL2Q86TH1 951 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PRUNE1Q86TP1 453 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 MED12LQ86YW9 2145 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 KRTAP19-1Q8IUB9 90 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PRR22Q8IZ63 422 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 ZNF540Q8NDQ6 660 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 OR6K3Q8NGY3 331 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 GCDHQ92947 438 aaPredicted RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 MUCL1Q96DR8 90 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PDLIM5Q96HC4 596 aaKnown RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 REXO5Q96IC2 774 aaKnown RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 OR10A5Q9H207 317 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PLSCR4Q9NRQ2 329 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 LYARQ9NX58 379 aaKnown RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 CTNNAL1Q9UBT7 734 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 PRODH2Q9UF12 536 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 BCAP29Q9UHQ4 241 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 MCTS1Q9ULC4 181 aaKnown RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 MED16Q9Y2X0 877 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 EPN1Q9Y6I3 576 aaPredicted RBP7.04□□□□□ -1.28
CASP4-201ENST00000393150 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
CASP4-201ENST00000393150 IGHV4-30-2A0A087WSY4 118 aa7.03□□□□□ -1.28
CASP4-201ENST00000393150 A0A0A6YYJ9 748 aa7.03□□□□□ -1.28
CASP4-201ENST00000393150 A0A0G2JK05 382 aa7.03□□□□□ -1.28
CASP4-201ENST00000393150 TCRBV7S2A1N4TA0A589 114 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms