RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ARRDC1Q8N5I2 433 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RNF182Q8N6D2 247 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 Q8N9W7 124 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ZBTB44Q8NCP5 570 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 Q8NFD4 153 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 NEIL3Q8TAT5 605 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 PHF10Q8WUB8 498 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 DLX4Q92988 240 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 UCN3Q969E3 161 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 LINC00477Q96M19 166 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ACCSQ96QU6 501 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RIOK1Q9BRS2 568 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 NTMT1Q9BV86 223 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 TM2D1Q9BX74 207 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RSPO3Q9BXY4 272 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 POLR2J2Q9GZM3 115 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 TSPYL1Q9H0U9 437 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 POLR2J3Q9H1A7 115 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 NXF3Q9H4D5 531 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 FAM124BQ9H5Z6 455 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 KAT8Q9H7Z6 458 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ZWILCHQ9H900 591 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SH2D2AQ9NP31 389 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 MMP26Q9NRE1 261 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 DUS2Q9NX74 493 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 AKAP7Q9P0M2 348 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 OR1A1Q9P1Q5 309 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 GIMAP2Q9UG22 337 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 PHF11Q9UIL8 331 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 FOXA2Q9Y261 457 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 WDR45Q9Y484 360 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SNX5Q9Y5X3 404 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ANKRD30BQ9BXX2 1392 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RAI1Q7Z5J4 1906 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 MEGF6O75095 1541 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 A0A0J9YXY3 114 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 IQANK1A0A1B0GTG1 560 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 LRCOL1A6NCL2 159 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 HELTA6NFD8 242 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 FAM166BA8MTA8 275 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 A8MUA0 341 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC28A1O00337 649 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 HSF2BPO75031 334 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 TRIM3O75382 744 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SPAG7O75391 227 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 HSPA4LO95757 839 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 INSP01308 110 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC4A1P02730 911 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 CD55P08174 381 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 OR8U8P0C7N1 319 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 PNMA6AP0CW24 399 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 H2AFXP16104 143 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 VCLP18206 1134 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 TBPP20226 339 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 MAGP20916 626 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 HNRNPA2B1P22626 353 aaKnown RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 ADORA2BP29275 332 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 AXLP30530 894 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 DLSTP36957 453 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 BTDP43251 543 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 RPS10P46783 165 aaKnown RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 GNPDA1P46926 289 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SERPINH1P50454 418 aaKnown RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF136P52737 540 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SH3BGRP55822 239 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 HERVK_113P63132 956 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 ERVK-8P63133 956 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 ACTA1P68133 377 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 YWHAHQ04917 246 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SRYQ05066 204 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC10A7Q0GE19 358 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 C17orf67Q0P5P2 114 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 KARSQ15046 597 aaKnown RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 CARTPTQ16568 116 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 AANATQ16613 207 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 CLPPQ16740 277 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 PARP6Q2NL67 630 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 KPRPQ5T749 579 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 UFSP1Q6NVU6 142 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 C16orf54Q6UWD8 224 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 GBP6Q6ZN66 633 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 ARCQ7LC44 396 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 HSD11B1LQ7Z5J1 315 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC22A16Q86VW1 577 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 CALHM3Q86XJ0 350 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 CHCHD4Q8N4Q1 142 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 TMEM252Q8N6L7 170 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 TMCO5AQ8N6Q1 288 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 SUMF2Q8NBJ7 301 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 OR4F17Q8NGA8 305 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 OR4A16Q8NH70 328 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 RDH5Q92781 318 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 MR1Q95460 341 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 MYDGFQ969H8 173 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 PSMG2Q969U7 264 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 C18orf25Q96B23 403 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 MRPL53Q96EL3 112 aaKnown RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 C11orf24Q96F05 449 aaPredicted RBP0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 TMEM80Q96HE8 168 aa0.76□□□□□ -2.29
SNORD28B-201ENST00000390993 OR4F4Q96R69 305 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms