RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 KCNJ11Q14654 390 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 SMC1AQ14683 1233 aaKnown RBP0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 RABGAP1LQ5R372 815 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 LIPKQ5VXJ0 399 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 GDPD3Q7L5L3 318 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 DNAJB7Q7Z6W7 309 aaPredicted RBP0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 OSR2Q8N2R0 312 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 FTMTQ8N4E7 242 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR6J1Q8NGC5 347 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR52I1Q8NGK6 324 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 RAET1EQ8TD07 263 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 C5orf30Q96GV9 206 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR10C1Q96KK4 312 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 RASL11BQ9BPW5 248 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 ATG101Q9BSB4 218 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 IDI2Q9BXS1 227 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 TEX13AQ9BXU3 409 aaPredicted RBP0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 FAM129AQ9BZQ8 928 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 IL1RAPL2Q9NP60 686 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 FANCFQ9NPI8 374 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 PNO1Q9NRX1 252 aaKnown RBP0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 MIS18AQ9NYP9 233 aa0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 MTRF1LQ9UGC7 380 aaKnown RBP0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 UBQLN1Q9UMX0 589 aaKnown RBP0.08□□□□□ -2.4
RNU6-239P-201ENST00000390990 NUP214P35658 2090 aaPredicted RBP0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 KAT6BQ8WYB5 2073 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 TRBV7-9A0A0J9YWB2 115 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 MAGEB16A2A368 324 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 FAM149AA5PLN7 773 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 C5orf52A6NGY3 159 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 A8MUU9 505 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 SELENOFO60613 162 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 PGK2P07205 417 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 TPBGLP0DKB5 382 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 PRB4P10163 310 aaPredicted RBP0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 ADORA2BP29275 332 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 NTSP30990 170 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 EFNB2P52799 333 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 CDO1Q16878 200 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 CFAP221Q4G0U5 840 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 GPAT3Q53EU6 434 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 CLEC4GQ6UXB4 293 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 C6orf120Q7Z4R8 191 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 MAATS1Q7Z4T9 603 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR4F17Q8NGA8 305 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 ZNF461Q8TAF7 563 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 DNAJA4Q8WW22 397 aaPredicted RBP0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 CKAP2Q8WWK9 683 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR1E3Q8WZA6 343 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 LHX4Q969G2 390 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 TVP23CQ96ET8 276 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR4F4Q96R69 305 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 SLC25A23Q9BV35 468 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 GPR61Q9BZJ8 451 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 IFI27L2Q9H2X8 130 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 ST6GALNAC4Q9H4F1 302 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 PNPLA3Q9NST1 481 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 SPRR3Q9UBC9 169 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 MORF4L1Q9UBU8 362 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 NUFIP1Q9UHK0 495 aaKnown RBP0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 CHTOPQ9Y3Y2 248 aaKnown RBP0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 FBN2P35556 2912 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 MUC5ACP98088 5654 aa0.07□□□□□ -2.4
RNU6-239P-201ENST00000390990 SVILO95425 2214 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 IGLV3-12A0A075B6K2 115 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 SH2D1BO14796 132 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 RRP8O43159 456 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 ANGPTL7O43827 346 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 KIAA0754O94854 1291 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 MPZL1O95297 269 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 TXNDC12O95881 172 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 MYBL1P10243 752 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 CRISP2P16562 243 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 MAT2AP31153 395 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 RPL29P47914 159 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 SH3BGRP55822 239 aaPredicted RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 IFI35P80217 286 aaPredicted RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 MRPS11P82912 194 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 CDKL1Q00532 357 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 PSG5Q15238 335 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 STK11Q15831 433 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 CYP51A1Q16850 503 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 TSEN54Q7Z6J9 526 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 LCA5Q86VQ0 697 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 CCAR2Q8N163 923 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 Q8N976 141 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 OR4L1Q8NH43 312 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 MRPS27Q92552 414 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 ESR2Q92731 530 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 PGAP3Q96FM1 320 aaPredicted RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 BSCL2Q96G97 398 aaPredicted RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 PDXPQ96GD0 296 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 CXorf58Q96LI9 332 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 NOX3Q9HBY0 568 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 EHFQ9NZC4 300 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 VPS18Q9P253 973 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 ZNF629Q9UEG4 869 aaPredicted RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 MRTO4Q9UKD2 239 aaKnown RBP0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 GPR34Q9UPC5 381 aa0.06□□□□□ -2.4
RNU6-239P-201ENST00000390990 ERVK-19Q9WJR5 959 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms