RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 EXOSC3Q9NQT5 275 aaKnown RBP4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 FAM120CQ9NX05 1096 aaKnown RBP4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 ARMCX1Q9P291 453 aa4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 MRPS7Q9Y2R9 242 aaKnown RBP4.29□□□□□ -1.72
RNU6-40P-201ENST00000384254 CACNA1FO60840 1977 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 TRAV9-2A0A087WT02 112 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 A0A1W2PPR1 153 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 FAM74A7A6NL05 159 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 DUX1O43812 170 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 RHBDL1O75783 438 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 RHOBTB1O94844 696 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 JCHAINP01591 159 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 PIGRP01833 764 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 CHRNA1P02708 482 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ACADSP16219 412 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 CAPN2P17655 700 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 SHC1P29353 583 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ACVR1BP36896 505 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 MAGEA5P43359 124 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 POU3F4P49335 361 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ACADVLP49748 655 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZFP36L1Q07352 338 aaKnown RBP4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 PUDPQ08623 228 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 CAMK4Q16566 473 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 PDK4Q16654 411 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 FAM74A3Q4VXF1 159 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 DCST2Q5T1A1 773 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ATAD3BQ5T9A4 648 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 FAM43BQ6ZT52 329 aaPredicted RBP4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 HSD11B1LQ7Z5J1 315 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ANKRD37Q7Z713 158 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 GTSCR1Q86UQ5 136 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 IFNEQ86WN2 208 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 ZDHHC21Q8IVQ6 265 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 PNPT1Q8TCS8 783 aaKnown RBP4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 VN1R17PQ8TDU5 208 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 MYLPFQ96A32 169 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 MCCC1Q96RQ3 725 aaPredicted RBP4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 TXN2Q99757 166 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 GPN2Q9H9Y4 310 aaPredicted RBP4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 OR10H1Q9Y4A9 318 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 GMPPBQ9Y5P6 360 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 SPACA6W5XKT8 324 aa4.28□□□□□ -1.72
RNU6-40P-201ENST00000384254 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.73
RNU6-40P-201ENST00000384254 A0A1B0GU03 582 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 TRIM3O75382 744 aaPredicted RBP4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 KIAA0754O94854 1291 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 UGT2B4P06133 528 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 FAM200BP0CF97 657 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 RPA2P15927 270 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 DRD5P21918 477 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 IGFBP5P24593 272 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 CHI3L1P36222 383 aaPredicted RBP4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 IL18R1Q13478 541 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 LINC01620Q4KN68 170 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 OR8G2PQ6IF36 304 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 LANCL3Q6ZV70 420 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 GRAMD2AQ8IUY3 354 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 MCOLN2Q8IZK6 566 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 MAPK1IP1LQ8NDC0 245 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 IPMKQ8NFU5 416 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 PIWIL1Q96J94 861 aaKnown RBP4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 TTC25Q96NG3 672 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 TESK2Q96S53 571 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 ATOH8Q96SQ7 321 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 RAB33BQ9H082 229 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 TMEM117Q9H0C3 514 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 UTP6Q9NYH9 597 aaKnown RBP4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 MRPL39Q9NYK5 338 aaKnown RBP4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 CYTH4Q9UIA0 394 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 MAD1L1Q9Y6D9 718 aa4.27□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZSCAN5CA6NGD5 496 aaPredicted RBP4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 PPIAL4DF5H284 164 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 G3V3Y1 287 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 MAGEB3O15480 346 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 UFL1O94874 794 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 GAS8-AS1O95177 125 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 ATP5A1P25705 553 aaKnown RBP4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 OTX2P32243 289 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 RPL4P36578 427 aaKnown RBP4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 FNTAP49354 379 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 RGS1Q08116 209 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 ATXN7L3Q14CW9 347 aaPredicted RBP4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 CHI3L2Q15782 390 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 CYP51A1Q16850 503 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 SLC22A6Q4U2R8 563 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 CFAP157Q5JU67 520 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 ZNF600Q6ZNG1 722 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 PPP1R42Q7Z4L9 355 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 SERINC5Q86VE9 423 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 FGFRL1Q8N441 504 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 BPIFB2Q8N4F0 458 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 SPATA3Q8NHX4 192 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 RAET1EQ8TD07 263 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 IL1F10Q8WWZ1 152 aa4.26□□□□□ -1.73
RNU6-40P-201ENST00000384254 APOL2Q9BQE5 337 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms