RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 CD163Q86VB7 1156 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 OR5K2Q8NHB8 316 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 GUCD1Q96NT3 240 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 KIAA1456Q9P272 454 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PDP2Q9P2J9 529 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PCDHGA3Q9Y5H0 932 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 OR51B4Q9Y5P0 310 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 MAGEA13PA6NCF6 341 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 SOCS2O14508 198 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 MAFKO60675 156 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ITGA10O75578 1167 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 HOXB6P17509 224 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 EXOSC7Q15024 291 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 DGUOKQ16854 277 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TMEM44Q2T9K0 475 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 IDNKQ5T6J7 187 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TMBIM1Q969X1 311 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 FUBP1Q96AE4 644 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 METTL2AQ96IZ6 378 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TRIB3Q96RU7 358 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TESQ9UGI8 421 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 GNG8Q9UK08 70 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC5A10A0PJK1 596 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TEX46H3BTG2 121 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 hCG_2039718K7EN88 272 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 UGDHO60701 494 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 FKBP6O75344 327 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ABHD16AO95870 558 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 C8BP07358 591 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 STARP49675 285 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PLCXD3Q63HM9 321 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 TMEM108Q6UXF1 575 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 GPALPP1Q8IXQ4 340 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 NIPA2Q8N8Q9 360 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 MFSD9Q8NBP5 474 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 OXNAD1Q96HP4 312 aaPredicted RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 MS4A4EQ96PG1 132 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF347Q96SE7 839 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 PTBP2Q9UKA9 531 aaKnown RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 SLC35A3Q9Y2D2 325 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 A0A0X1KG70 313 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 BCKDKO14874 412 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 SLCO2B1O94956 709 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 BMXP51813 675 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 GFERP55789 205 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 C8orf59Q8N0T1 100 aaPredicted RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 OR4N2Q8NGD1 307 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ELP5Q8TE02 316 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 C16orf78Q8WTQ4 265 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 HRASLS5Q96KN8 279 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ZIM3Q96PE6 472 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ERMAPQ96PL5 475 aaPredicted RBP8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF382Q96SR6 550 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 CNTN6Q9UQ52 1028 aa8.64□□□□□ -1.03
LIMCH1-202ENST00000381753 OR6C65A6NJZ3 312 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 C12orf71A8MTZ7 269 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 LRRTM2O43300 516 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 METTL18O95568 372 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 IGHG1P01857 330 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 H1F0P07305 194 aaKnown RBP8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 FGF4P08620 206 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 ZGLP1P0C6A0 271 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 TIA1P31483 386 aaKnown RBP eCLIP8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 ATP5J2P56134 94 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 ZNF844Q08AG5 666 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 HFEQ30201 348 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 TPRG1LQ5T0D9 272 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 ERMP1Q7Z2K6 904 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 CBARPQ8N350 705 aaPredicted RBP8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 OR52N5Q8NH56 324 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 BOCQ9BWV1 1114 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 POLR2J3Q9H1A7 115 aaKnown RBP8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 GALPQ9UBC7 116 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 KLF11O14901 512 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 HAT1O14929 419 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 CREG1O75629 220 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 TGDSO95455 350 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 CLEC3BP05452 202 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 CD3GP09693 182 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 PROZP22891 400 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 STARD6P59095 220 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 ADAM8P78325 824 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 RPL19P84098 196 aaKnown RBP8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 COL28A1Q2UY09 1125 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 RNASE12Q5GAN4 147 aaKnown RBP8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 SYT14Q8NB59 555 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 TXNDC15Q96J42 360 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 GNRHR2Q96P88 292 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 MRI1Q9BV20 369 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 CPNE5Q9HCH3 593 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 LHX9Q9NQ69 397 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 SSR3Q9UNL2 185 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 H7C2Y5 167 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 CH25HO95992 272 aa8.63□□□□□ -1.03
LIMCH1-202ENST00000381753 OPN1SWP03999 348 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms