RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZSCAN32Q9NX65 697 aa8.82□□□□□ -1
PTPRA-204ENST00000380393 RPH3ALQ9UNE2 315 aa8.82□□□□□ -1
PTPRA-204ENST00000380393 CCDC85CA6NKD9 419 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 LRRTM2O43300 516 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 SOCS5O75159 536 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 GLP2RO95838 553 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PTPN3P26045 913 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 HTR2AP28223 471 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 CSNK1EP49674 416 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 HCCSP53701 268 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 OR2B8PP59922 312 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 MRPS10P82664 201 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 MAP4K2Q12851 820 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 DEFB115Q30KQ5 88 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PCID2Q5JVF3 399 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 SDHAF4Q5VUM1 108 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 VHLLQ6RSH7 139 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 LYPD4Q6UWN0 246 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 LRRC28Q86X40 367 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 OSTF1Q92882 214 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 GAL3ST3Q96A11 431 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 TPD52L3Q96J77 140 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ACPTQ9BZG2 426 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ABHD16BQ9H3Z7 469 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PTGES2Q9H7Z7 377 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 FZD3Q9NPG1 666 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 CARHSP1Q9Y2V2 147 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 PPIL1Q9Y3C6 166 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 DOCK5Q9H7D0 1870 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 A0A1W2PRB8 838 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PRRT4C9JH25 899 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ZNF593O00488 134 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 PRRG1O14668 218 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 OR1I1O60431 355 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 JCHAINP01591 159 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 THBS1P07996 1170 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 TMIGD3P0DMS9 266 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 ARF4P18085 180 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 HLA-DPA1P20036 260 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 AHRP35869 848 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ZFP36L2P47974 494 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 STK19P49842 368 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 SH3BP2P78314 561 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 EGR3Q06889 387 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 SLBPQ14493 270 aaKnown RBP eCLIP8.81□□□□□ -1
PTPRA-204ENST00000380393 GINS1Q14691 196 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 INPP5JQ15735 1006 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 INTS6LQ5JSJ4 861 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 SYPL2Q5VXT5 272 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 EEF1DP3Q658K8 133 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PHYHIPQ92561 330 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 REEP1Q9H902 201 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 CACYBPQ9HB71 228 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 TREM1Q9NP99 234 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 MED17Q9NVC6 651 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 AIG1Q9NVV5 245 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 NDUFB11Q9NX14 153 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 RASL12Q9NYN1 266 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ZNF226Q9NYT6 803 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 RPS6KB2Q9UBS0 482 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 LRRC14BA6NHZ5 514 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 TPST2O60704 377 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 FARS2O95363 451 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 CTGFP29279 349 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 OR1E1P30953 314 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 SLC6A4P31645 630 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PRKXP51817 358 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 OAZ1P54368 228 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 RAP2BP61225 183 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 FKBP1BP68106 108 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 FOXK1P85037 733 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 NFKB2Q00653 900 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 TMEM95Q3KNT9 176 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 RNASE12Q5GAN4 147 aaKnown RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 PLAG1Q6DJT9 500 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 TPRA1Q86W33 373 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 KLHDC8BQ8IXV7 354 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 OR1S2Q8NGQ3 325 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 NETO1Q8TDF5 533 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 MYLIPQ8WY64 445 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 C1GALT1C1Q96EU7 318 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 HPDLQ96IR7 371 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 CLCC1Q96S66 551 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ACBD6Q9BR61 282 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 CPPED1Q9BRF8 314 aaPredicted RBP8.81□□□□□ -1
PTPRA-204ENST00000380393 CHST5Q9GZS9 411 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 ASF1BQ9NVP2 202 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 PARPBPQ9NWS1 579 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 IL17BQ9UHF5 180 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 CLEC2DQ9UHP7 191 aa8.81□□□□□ -1
PTPRA-204ENST00000380393 LOC285095A0A1B0GVY8 99 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 ITGB1BP1O14713 200 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 CSO75390 466 aaKnown RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 INHAP05111 366 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 UBCP0CG48 685 aaKnown RBP8.8□□□□□ -1
PTPRA-204ENST00000380393 CD200P41217 278 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 TAS2R39P59534 338 aa8.8□□□□□ -1
PTPRA-204ENST00000380393 PSMA6P60900 246 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms