RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 DUSP19Q8WTR2 217 aa20.8■□□□□ 0.92
U2AF1-202ENST00000380276 GFM2Q969S9 779 aaKnown RBP20.8■□□□□ 0.92
U2AF1-202ENST00000380276 FUT8Q9BYC5 575 aa20.8■□□□□ 0.92
U2AF1-202ENST00000380276 RNF122Q9H9V4 155 aa20.8■□□□□ 0.92
U2AF1-202ENST00000380276 Q9N2J8 555 aa20.8■□□□□ 0.92
U2AF1-202ENST00000380276 DDX18Q9NVP1 670 aaKnown RBP20.8■□□□□ 0.92
U2AF1-202ENST00000380276 TIMM22Q9Y584 194 aa20.8■□□□□ 0.92
U2AF1-202ENST00000380276 FADS1O60427 444 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 PLGP00747 810 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-202ENST00000380276 SNRPAP09012 282 aaKnown RBP20.79■□□□□ 0.92
U2AF1-202ENST00000380276 CD8BP10966 210 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 ZNHIT3Q15649 155 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-202ENST00000380276 CYP27C1Q4G0S4 372 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 PRIMA1Q86XR5 153 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 FMO2Q99518 471 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 TBL1XR1Q9BZK7 514 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 TMEM216Q9P0N5 145 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 ZNF180Q9UJW8 692 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 MRTO4Q9UKD2 239 aaKnown RBP20.79■□□□□ 0.92
U2AF1-202ENST00000380276 ABCG2Q9UNQ0 655 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 ZNF175Q9Y473 711 aa20.79■□□□□ 0.92
U2AF1-202ENST00000380276 CCDC151A5D8V7 595 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 SHISA8B8ZZ34 492 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 LINC01387J3KSC0 135 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 CGAP01215 116 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 FCGR2AP12318 317 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 TBXA2RP21731 343 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 NTSP30990 170 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 PTH2RP49190 550 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 PCYT1AP49585 367 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 IMPG1Q17R60 797 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 PLEKHM3Q6ZWE6 761 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 RELL1Q8IUW5 271 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 TMEM151AQ8N4L1 468 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 C1GALT1C1Q96EU7 318 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 KCNA7Q96RP8 456 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 RTN4RQ9BZR6 473 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 TSPYL1Q9H0U9 437 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 CLEC4AQ9UMR7 237 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 STK38LQ9Y2H1 464 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 EMC9Q9Y3B6 208 aa20.78■□□□□ 0.92
U2AF1-202ENST00000380276 A0A087WUV0 522 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-202ENST00000380276 KIAA1324LA8MWY0 1029 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-202ENST00000380276 INAFM1C9JVW0 142 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 EIF1AYO14602 144 aaKnown RBP20.77■□□□□ 0.92
U2AF1-202ENST00000380276 DLX3O60479 287 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 DDCP20711 480 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 EIF1AXP47813 144 aaKnown RBP20.77■□□□□ 0.92
U2AF1-202ENST00000380276 ZNF763Q0D2J5 394 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 FAM214BQ7L5A3 538 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 PPP1R14CQ8TAE6 165 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 FAM120CQ9NX05 1096 aaKnown RBP20.77■□□□□ 0.92
U2AF1-202ENST00000380276 VDAC3Q9Y277 283 aa20.77■□□□□ 0.92
U2AF1-202ENST00000380276 EXOC1LA0A1B0GW35 172 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 MYO1GB0I1T2 1018 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 ENO1P06733 434 aaKnown RBP20.76■□□□□ 0.91
U2AF1-202ENST00000380276 ATP5F1P24539 256 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-202ENST00000380276 GSTM5P46439 218 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 PSMD4P55036 377 aaKnown RBP20.76■□□□□ 0.91
U2AF1-202ENST00000380276 CTBP2P56545 445 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 TMEM171Q8WVE6 324 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 SHCBP1LQ9BZQ2 653 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 EQTNQ9NQ60 294 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 POLR3HQ9Y535 204 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-202ENST00000380276 AP4B1Q9Y6B7 739 aa20.76■□□□□ 0.91
U2AF1-202ENST00000380276 A0A087WV62 115 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.75■□□□□ 0.91
U2AF1-202ENST00000380276 AQP8O94778 261 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 UTS2O95399 124 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 CNOT4O95628 575 aaKnown RBP20.75■□□□□ 0.91
U2AF1-202ENST00000380276 IL33O95760 270 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 IMPDH1P20839 514 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 PKNOX1P55347 436 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 LCP2Q13094 533 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 PRSS53Q2L4Q9 553 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 BEX5Q5H9J7 111 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 ALKBH2Q6NS38 261 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 C22orf34Q6ZV56 151 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 WFDC8Q8IUA0 241 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 METTL25Q8N6Q8 603 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 CAVIN3Q969G5 261 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 MARK4Q96L34 752 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 GSX2Q9BZM3 304 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 C3orf14Q9HBI5 128 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 STOML1Q9UBI4 398 aa20.75■□□□□ 0.91
U2AF1-202ENST00000380276 C19orf53Q9UNZ5 99 aaPredicted RBP20.75■□□□□ 0.91
U2AF1-202ENST00000380276 UPK1AO00322 258 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 DSCAMO60469 2012 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 URI1O94763 535 aaPredicted RBP20.74■□□□□ 0.91
U2AF1-202ENST00000380276 SLITRK5O94991 958 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 ANGPTL1O95841 491 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 GABRA3P34903 492 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 C17orf67Q0P5P2 114 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 GALNT18Q6P9A2 607 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 ZNF704Q6ZNC4 412 aaPredicted RBP20.74■□□□□ 0.91
U2AF1-202ENST00000380276 SLC22A9Q8IVM8 553 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 CCNYL1Q8N7R7 359 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 CEP112Q8N8E3 955 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 SLC9A6Q92581 669 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 MDFIQ99750 246 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms