RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ICAM1P05362 532 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SERPINA2P20848 420 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 BTG1P62324 171 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 LINGO4Q6UY18 593 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 EXD3Q8N9H8 876 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR13D1Q8NGV5 346 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR6N2Q8NGY6 317 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PSMF1Q92530 271 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 DGAT2Q96PD7 388 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 INTS14Q96SY0 518 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 SLC17A6Q9P2U8 582 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SPHKAPQ2M3C7 1700 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ROBO3Q96MS0 1386 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CXCL8P10145 99 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SOX2P48431 317 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TOB1P50616 345 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZNF92Q03936 586 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SLC14A1Q13336 389 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 DECR1Q16698 335 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SLX4IPQ5VYV7 408 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZNF704Q6ZNC4 412 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 CATSPERGQ6ZRH7 1159 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 XYLT1Q86Y38 959 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CPNE8Q86YQ8 564 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TEX26Q8N6G2 289 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TBC1D20Q96BZ9 403 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 LRR1Q96L50 414 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PDGFDQ9GZP0 370 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 UBQLN3Q9H347 655 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PLEKHJ1Q9NW61 149 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 KNTC1P50748 2209 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 HPGDSO60760 199 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 EEDO75530 441 aaKnown RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 MAS1P04201 325 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ARSBP15848 533 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 EBPQ15125 230 aaKnown RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 TMPPEQ6ZT21 453 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 RNF130Q86XS8 419 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 GLB1L2Q8IW92 636 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR4K2Q8NGD2 314 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR51T1Q8NGJ9 327 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PIGQQ9BRB3 760 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SMOXQ9NWM0 555 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 FTCDNL1E5RQL4 147 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 DVL2O14641 736 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 RGS11O94810 467 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PCCBP05166 539 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 FHP07954 510 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 MMP3P08254 477 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 NAA10P41227 235 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 SPP2Q13103 211 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 FAM180BQ6P0A1 224 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 NPAS3Q8IXF0 933 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TMEM234Q8WY98 164 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZNF281Q9Y2X9 895 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 BACE2Q9Y5Z0 518 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 A8MX80 341 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SURF4O15260 269 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TBX19O60806 448 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZIC2O95409 532 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 RAF1P04049 648 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 UQCRC2P22695 453 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PYCR1P32322 319 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ACVR1BP36896 505 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 LIPJQ5W064 366 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 FRG2Q64ET8 278 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 RHBDF2Q6PJF5 856 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZNF573Q86YE8 665 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR1J1Q8NGS3 322 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR10G6Q8NH81 332 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ZFP90Q8TF47 636 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 DUSP19Q8WTR2 217 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 FRG2BQ96QU4 278 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 IL37Q9NZH6 218 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SIRPGQ9P1W8 387 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CYB5R1Q9UHQ9 305 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TRPM1Q7Z4N2 1603 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PRSS51A0A1B0GVH4 220 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SOCS2O14508 198 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 DVL1O14640 695 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 FABP7O15540 132 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 GJB1P08034 283 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CTSHP09668 335 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ACSM4P0C7M7 580 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 GCAP28676 217 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 RFX5P48382 616 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 MZT1Q08AG7 82 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CHADLQ6NUI6 762 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 STEAP1BQ6NZ63 245 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 TMEM135Q86UB9 458 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 OR5W2Q8NH69 310 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 CMTM2Q8TAZ6 248 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms