RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SRP9P49458 86 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 MESP2Q0VG99 397 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 FAM27D1Q5T7N8 215 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 MRGPREQ86SM8 312 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 VRK2Q86Y07 508 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 KLHL36Q8N4N3 616 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 POGLUT1Q8NBL1 392 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 DNAJA4Q8WW22 397 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 HYLS1Q96M11 299 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 TBX5Q99593 518 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 C17orf62Q9BQA9 187 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 EPHX3Q9H6B9 360 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 NCKAP1Q9Y2A7 1128 aa13.22□□□□□ -0.29
CLCNKA-202ENST00000375692 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 ZC3H12DA2A288 527 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 SPINT1O43278 529 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 CHP2O43745 196 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 OR1F1O43749 312 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 C8orf89P0DMQ9 161 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 SLC6A1P30531 599 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 TSPAN31Q12999 210 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 RIN1Q13671 783 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 DSG2Q14126 1118 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 NDUFAF5Q5TEU4 345 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 SDE2Q6IQ49 451 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 LINC00471Q8N535 108 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 TTC9Q92623 222 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 RAD51AP1Q96B01 352 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 CREB3L1Q96BA8 519 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 COQ10AQ96MF6 247 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 COQ7Q99807 217 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 AIF1LQ9BQI0 150 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 ABCG5Q9H222 651 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 IMP3Q9NV31 184 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 MOSPD1Q9UJG1 213 aa13.21□□□□□ -0.29
CLCNKA-202ENST00000375692 SURF4O15260 269 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 NDUFS4O43181 175 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 TBX19O60806 448 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 SCO1O75880 301 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 SYPP08247 313 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 NNMTP40261 264 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 DUSP2Q05923 314 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 RRM2BQ7LG56 351 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 NUDT13Q86X67 352 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 CCDC116Q8IYX3 515 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 SIRT6Q8N6T7 355 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 OR51G2Q8NGK0 314 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 MED28Q9H204 178 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 NARFLQ9H6Q4 476 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 EQTNQ9NQ60 294 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 SPHK2Q9NRA0 654 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 TM7SF3Q9NS93 570 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC23A2Q9UGH3 650 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF222Q9UK12 451 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 MGAT4AQ9UM21 535 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 A0A0C4DFX4 3053 aa13.21□□□□□ -0.3
CLCNKA-202ENST00000375692 MYO10Q9HD67 2058 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 PGRMC2O15173 223 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 EEF1E1O43324 174 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 PAPLNO95428 1278 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 SHC1P29353 583 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 OMPP47874 163 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 PLA1AQ53H76 456 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF322Q6U7Q0 402 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 KRT74Q7RTS7 529 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 FAM20CQ8IXL6 584 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 GPR135Q8IZ08 494 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 OR11H7Q8NGC8 314 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 BBS10Q8TAM1 723 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 RGMAQ96B86 450 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 NACC2Q96BF6 587 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 FCRL4Q96PJ5 515 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC35C2Q9NQQ7 365 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 ACSS1Q9NUB1 689 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 LZTS3O60299 673 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 PIP5K1CO60331 668 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 SLC19A2O60779 497 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 RFPL3O75679 317 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 TBXA2RP21731 343 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 KELP23276 732 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 PTBP1P26599 531 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 OR10A3P58181 314 aa13.2□□□□□ -0.3
CLCNKA-202ENST00000375692 STXBP1P61764 594 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms