RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 FAM120CQ9NX05 1096 aaKnown RBP12.87□□□□□ -0.35
NELFE-201ENST00000375425 GALNT8Q9NY28 637 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 SH3BP4Q9P0V3 963 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 MID2Q9UJV3 735 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 EDARQ9UNE0 448 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 ZNF337Q9Y3M9 751 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 DNAJC15Q9Y5T4 150 aa12.87□□□□□ -0.35
NELFE-201ENST00000375425 SETD2Q9BYW2 2564 aaPredicted RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 PRRC2AP48634 2157 aaKnown RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 GXYLT2A0PJZ3 443 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 A8MXE2 369 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 HCRTR2O43614 444 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 TNFSF13O75888 250 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 UTS2O95399 124 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 CHEK2O96017 543 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 IFI6P09912 130 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 SDC1P18827 310 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 DNASE1P24855 282 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 GPC1P35052 558 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 PRKAG1P54619 331 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 MANFP55145 182 aaKnown RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 EEF1A1P68104 462 aaKnown RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 ZNF385BQ569K4 471 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 EEF1A1P5Q5VTE0 462 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 APOOLQ6UXV4 268 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 P4HA3Q7Z4N8 544 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 EXOC3L1Q86VI1 746 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 OR2W6PQ8NHA6 318 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 CLHC1Q8NHS4 586 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 PIK3R3Q92569 461 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 ZBED6CLQ96FA7 236 aaPredicted RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 FCRL1Q96LA6 429 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 DOCK7Q96N67 2140 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 TBL1XR1Q9BZK7 514 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 IQCGQ9H095 443 aaKnown RBP12.86□□□□□ -0.35
NELFE-201ENST00000375425 CXXC4Q9H2H0 198 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 PIGMQ9H3S5 423 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 REEP4Q9H6H4 257 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 L2HGDHQ9H9P8 463 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
NELFE-201ENST00000375425 MTORP42345 2549 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 A0A1W2PNV4 684 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 TTC36A6NLP5 189 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 H0YC42 278 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 LSM1O15116 133 aaKnown RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 TBX19O60806 448 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 KCNH1O95259 989 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 IGKV1D-16P01601 117 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 CHRNGP07510 517 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 FGF4P08620 206 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 NEFHP12036 1026 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 ALDH3A1P30838 453 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 MAP3K8P41279 467 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 DIO3P55073 304 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 TPD52P55327 224 aaPredicted RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 RPL38P63173 70 aaKnown RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 C17orf67Q0P5P2 114 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 RNF165Q6ZSG1 346 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 BANPQ8N9N5 519 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 NUP43Q8NFH3 380 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 CEP70Q8NHQ1 597 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 GPR151Q8TDV0 419 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 PPCDCQ96CD2 204 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 C1GALT1C1Q96EU7 318 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 ZNF764Q96H86 408 aaPredicted RBP12.85□□□□□ -0.35
NELFE-201ENST00000375425 DACH2Q96NX9 599 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 CCT7Q99832 543 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 PIGQQ9BRB3 760 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 YIPF4Q9BSR8 244 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 PACSIN3Q9UKS6 424 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 TMED5Q9Y3A6 229 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 TRAF6Q9Y4K3 522 aa12.85□□□□□ -0.35
NELFE-201ENST00000375425 OR2M5A3KFT3 312 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 SLC22A20A6NK97 555 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 TMEM233B4DJY2 109 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 LINC01387J3KSC0 135 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 GMFGO60234 142 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 ANGPTL1O95841 491 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 FRKP42685 505 aaPredicted RBP12.84□□□□□ -0.35
NELFE-201ENST00000375425 PRR5P85299 388 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 PDE7AQ13946 482 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 UGT3A2Q3SY77 523 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 VPS26BQ4G0F5 336 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
NELFE-201ENST00000375425 OR2A2Q6IF42 318 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 GALNT10Q86SR1 603 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 DDIASQ8IXT1 998 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 CNEP1R1Q8N9A8 125 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 CDRT4Q8N9R6 151 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms