RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IMP3Q9NV31 184 aaKnown RBP10.4□□□□□ -0.75
CCDC40-203ENST00000374877 TEX10Q9NXF1 929 aaPredicted RBP10.4□□□□□ -0.75
CCDC40-203ENST00000374877 CLDND1Q9NY35 253 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 U3KQ87 197 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 MYO7AQ13402 2215 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 CIB4A0PJX0 185 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 SERPIND1P05546 499 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 LAMP2P13473 410 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 GNSP15586 552 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 TIMP2P16035 220 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 SRP9P49458 86 aaKnown RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF155Q12901 538 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 NTRK2Q16620 822 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 CDONQ4KMG0 1287 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 KHDRBS2Q5VWX1 349 aaKnown RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 WASH2PQ6VEQ5 465 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 BPHLQ86WA6 291 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 LINC00471Q8N535 108 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF655Q8N720 491 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF366Q8N895 744 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 BBS1Q8NFJ9 593 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 OR11H7Q8NGC8 314 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 BTBD1Q9H0C5 482 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 NT5DC2Q9H857 520 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ASF1AQ9Y294 204 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 LOC105369274A0A096LPK9 316 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 FEZF1A0PJY2 475 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 CPSF4LA6NMK7 179 aaKnown RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ACP5P13686 325 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 LTBRP36941 435 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 BTG1P62324 171 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 RIN1Q13671 783 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 FGFBP1Q14512 234 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 GRIN2CQ14957 1233 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 MTSS1LQ765P7 747 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 LUZP2Q86TE4 346 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 NR2C2APQ86WQ0 139 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 OR4N4Q8N0Y3 316 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 GHDCQ8N2G8 530 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF485Q8NCK3 441 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 KLK6Q92876 244 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 RFKQ969G6 155 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 NACC2Q96BF6 587 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 FCRL4Q96PJ5 515 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 TBX5Q99593 518 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ELF5Q9UKW6 265 aaPredicted RBP10.39□□□□□ -0.75
CCDC40-203ENST00000374877 CLEC4AQ9UMR7 237 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 POLHQ9Y253 713 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 ASB4Q9Y574 426 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 CSNK1G3Q9Y6M4 447 aa10.39□□□□□ -0.75
CCDC40-203ENST00000374877 PRR23AA6NEV1 266 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 KDM4EB2RXH2 506 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 PI15O43692 258 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 EPPINO95925 133 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 SYPP08247 313 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 CFL1P23528 166 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TRIM23P36406 574 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 NNMTP40261 264 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 DLX2Q07687 328 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 RPA4Q13156 261 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 PLA1AQ53H76 456 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TMEM91Q6ZNR0 172 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 GLRX5Q86SX6 157 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 YAF2Q8IY57 180 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 MSANTD3Q96H12 275 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 GPR137Q96N19 417 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 DPCDQ9BVM2 203 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 DDX31Q9H8H2 851 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 H2AFY2Q9P0M6 372 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 EIF3KQ9UBQ5 218 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TAC3Q9UHF0 121 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 SLC13A4Q9UKG4 626 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 DENND4AQ7Z401 1863 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 EIF4EP06730 217 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TFPIP10646 304 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 UBL4AP11441 157 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 ANXA3P12429 323 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF250P15622 560 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 HK1P19367 917 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 SSTR2P30874 369 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 RGS1Q08116 209 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF267Q14586 743 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 LASP1Q14847 261 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 SMRP1Q8NCR6 262 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 OR11H4Q8NGC9 324 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 OR51G2Q8NGK0 314 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 GNPDA2Q8TDQ7 276 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 SUSD6Q92537 303 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 ZFP64Q9NPA5 681 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 CACNG2Q9Y698 323 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 GLOD5A6NK44 160 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 FAM183AA6NL82 134 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 WASH3PC4AMC7 463 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 CACNB4O00305 520 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TMPRSS11DO60235 418 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 OR7A10O76100 309 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 SLC2A10O95528 541 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 CHRM4P08173 479 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms