RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CNIH2Q6PI25 160 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 CFAP77Q6ZQR2 320 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM173Q86WV6 379 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 PGAM5Q96HS1 289 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC6A16Q9GZN6 736 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 ZBTB20Q9HC78 741 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 FANCFQ9NPI8 374 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SERTAD3Q9UJW9 196 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 PIAS3Q9Y6X2 628 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 F5H5P2 479 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 G3V2L1 256 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 TSPAN15O95858 294 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 PRKACBP22694 351 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 GMPRP36959 345 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 MFSD13AQ14CX5 517 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SGCAQ16586 387 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 CATSPEREQ5SY80 951 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 UBE2UQ5VVX9 321 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 CLECL1Q8IZS7 167 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 OR52E2Q8NGJ4 325 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 HUS1BQ8NHY5 278 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 FBXO27Q8NI29 283 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 NETO1Q8TDF5 533 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SETD7Q8WTS6 366 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 FAM46AQ96IP4 442 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 MMP28Q9H239 520 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM45AQ9NWC5 275 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 UBE2J1Q9Y385 318 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SPDEFO95238 335 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 KLK3P07288 261 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF35P13682 527 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SF3A2Q15428 464 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 HOXB13Q92826 284 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC29A1Q99808 456 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SDR39U1Q9NRG7 319 aaPredicted RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 MAN2C1Q9NTJ4 1040 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 LOC285095A0A1B0GVY8 99 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 IGLON5A6NGN9 336 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 C2orf74A8MZ97 194 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 DNAJB6O75190 326 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 ARHGEF15O94989 841 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 PIWIL3Q7Z3Z3 882 aaKnown RBP11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 GALNT10Q86SR1 603 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 KDM1BQ8NB78 822 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 POC1BQ8TC44 478 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 F2RL3Q96RI0 385 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF559Q9BR84 538 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 ZBP1Q9H171 429 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 SCML1Q9UN30 329 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 HCFC2Q9Y5Z7 792 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 ACTL7AQ9Y615 435 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 CACNG2Q9Y698 323 aa11.62□□□□□ -0.55
NPLOC4-202ENST00000374747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC22A5O76082 557 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 CFIP05156 583 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 PTPN6P29350 595 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 EVI2BP34910 448 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 NXPE4Q6UWF7 544 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 OR2T4Q8NH00 348 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 MVB12BQ9H7P6 319 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ICKQ9UPZ9 632 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 GPR52Q9Y2T5 361 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 SMAD6O43541 496 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 DHRS4L1P0CG22 281 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 THEGLP0DJG4 465 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TYRP1P17643 537 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 PPA1Q15181 289 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM35AQ53FP2 167 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 OR52E8Q6IFG1 317 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 UNC5DQ6UXZ4 953 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ISCA2Q86U28 154 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 DTWD1Q8N5C7 304 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ECHDC3Q96DC8 303 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 MMABQ96EY8 250 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 SSX3Q99909 188 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 RBCK1Q9BYM8 510 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 A8MU76 341 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 NPIPA2E9PIF3 369 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 NPIPA3F8WFD2 350 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ABLIM3O94929 683 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 CDK4P11802 303 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 KCNJ5P48544 419 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 GRIN2CQ14957 1233 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 SHFQ7M4L6 423 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 OR5H2Q8NGV7 314 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 MAPK15Q8TD08 544 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF597Q96LX8 424 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 NMNAT1Q9HAN9 279 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 UBFD1O14562 309 aaKnown RBP11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 IL33O95760 270 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 IFNGR1P15260 489 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 INAVAQ3KP66 663 aa11.61□□□□□ -0.55
NPLOC4-202ENST00000374747 HES5Q5TA89 166 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms