RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CCNKO75909 580 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 SLITRK5O94991 958 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 PIPP12273 146 aaPredicted RBP15.94■□□□□ 0.14
RXRB-201ENST00000374680 MAGEA8P43361 318 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 LARS2Q15031 903 aaKnown RBP15.94■□□□□ 0.14
RXRB-201ENST00000374680 TRAM2Q15035 370 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 C19orf48Q6RUI8 117 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 ASPGQ86U10 573 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 TRIM69Q86WT6 500 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 NRROSQ86YC3 692 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 ANKHQ9HCJ1 492 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 KLHL28Q9NXS3 571 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 CFAP54Q96N23 3096 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 A0A1W2PQ09 198 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 ISPDA4D126 451 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 CDC123O75794 336 aaPredicted RBP15.94■□□□□ 0.14
RXRB-201ENST00000374680 CTSBP07858 339 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 MSL3P1P0C860 447 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 TYRP1P17643 537 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 NT5EP21589 574 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 FABP5Q01469 135 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 TEKQ02763 1124 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 COX10Q12887 443 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 OCLNQ16625 522 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 PUS10Q3MIT2 529 aaKnown RBP15.94■□□□□ 0.14
RXRB-201ENST00000374680 SDE2Q6IQ49 451 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 CDC73Q6P1J9 531 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 GDF7Q7Z4P5 450 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 ZNF438Q7Z4V0 828 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 CPOQ8IVL8 374 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 IL17RCQ8NAC3 791 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 PIGXQ8TBF5 258 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 SLC41A3Q96GZ6 507 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 TCEAL2Q9H3H9 227 aaPredicted RBP15.94■□□□□ 0.14
RXRB-201ENST00000374680 SP140LQ9H930 580 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 DDX28Q9NUL7 540 aaKnown RBP15.94■□□□□ 0.14
RXRB-201ENST00000374680 SNX7Q9UNH6 387 aa15.94■□□□□ 0.14
RXRB-201ENST00000374680 ZNF670-ZNF695F2Z2N8 137 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 CASKO14936 926 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 UBXN7O94888 489 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 MRPL3P09001 348 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 NTSR1P30989 418 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 WNT4P56705 351 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 OR2B6P58173 313 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TRA2BP62995 288 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 ST3GAL3Q11203 375 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 C1orf61Q13536 156 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 CCDC85BQ15834 202 aaPredicted RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 ZNF79Q15937 498 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 FAM214AQ32MH5 1076 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TMEM201Q5SNT2 666 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 GLCCI1Q86VQ1 547 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TRIM48Q8IWZ4 208 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 MFSD9Q8NBP5 474 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TMEM163Q8TC26 289 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 GRHL3Q8TE85 626 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 SLC38A2Q96QD8 506 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 SECISBP2Q96T21 854 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 ACTRT3Q9BYD9 372 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 CPNE5Q9HCH3 593 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 BCL2L10Q9HD36 194 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 NDUFB11Q9NX14 153 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 HYKKA2RU49 373 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 FABP12A6NFH5 140 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 REM1O75628 298 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 ANXA11P50995 505 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 COPZ1P61923 177 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 DMPKQ09013 629 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 MLLT11Q13015 90 aaPredicted RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 MLC1Q15049 377 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 NNATQ16517 81 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 LRIT3Q3SXY7 679 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 PYDC2Q56P42 97 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 PLBD1Q6P4A8 553 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TUBA3EQ6PEY2 450 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TMEM52Q8NDY8 209 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 PFN4Q8NHR9 129 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 DIO2Q92813 273 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 OR51V1Q9H2C8 321 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 NKX2-4Q9H2Z4 354 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 TESQ9UGI8 421 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 DIMT1Q9UNQ2 313 aaKnown RBP15.93■□□□□ 0.14
RXRB-201ENST00000374680 BOLA1Q9Y3E2 137 aa15.93■□□□□ 0.14
RXRB-201ENST00000374680 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.92■□□□□ 0.14
RXRB-201ENST00000374680 SLC35G6P0C7Q6 338 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 LIMS3P0CW19 117 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 LIMS4P0CW20 117 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 RPS7P62081 194 aaKnown RBP15.92■□□□□ 0.14
RXRB-201ENST00000374680 RGS1Q08116 209 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 SF3B4Q15427 424 aaKnown RBP eCLIP15.92■□□□□ 0.142e-7■■■■□ 24.8
RXRB-201ENST00000374680 SLC36A4Q6YBV0 504 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 FRRS1Q6ZNA5 592 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 KLBQ86Z14 1044 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 LRRC25Q8N386 305 aaPredicted RBP15.92■□□□□ 0.14
RXRB-201ENST00000374680 OR4K14Q8NGD5 310 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 OR51A7Q8NH64 312 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 GNPDA2Q8TDQ7 276 aa15.92■□□□□ 0.14
RXRB-201ENST00000374680 GIMAP5Q96F15 307 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms