RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GPBAR1Q8TDU6 330 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 DNASE2BQ8WZ79 361 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 CDS1Q92903 461 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 MTHFD2LQ9H903 347 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 IL21RQ9HBE5 538 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 TBCCD1Q9NVR7 557 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 PTGFRNQ9P2B2 879 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 GPR55Q9Y2T6 319 aaPredicted RBP11.29□□□□□ -0.6
HMGCL-202ENST00000374487 KLK4Q9Y5K2 254 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 SLC22A7Q9Y694 548 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 RALGAPA1Q6GYQ0 2036 aa11.29□□□□□ -0.6
HMGCL-202ENST00000374487 A0A087WUU8 490 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 CCRL2O00421 344 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 DNAJB6O75190 326 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 SULT1C4O75897 302 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 TP53P04637 393 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 CTSEP14091 401 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 CPMP14384 443 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 ID2Q02363 134 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 NCF4Q15080 339 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 OCLNQ16625 522 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 ENTPD8Q5MY95 495 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 MFSD4BQ5TF39 518 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 USP53Q70EK8 1073 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 BCDIN3DQ7Z5W3 292 aaKnown RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 C11orf74Q86VG3 221 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 MEX3DQ86XN8 651 aaKnown RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 PEX5LQ8IYB4 626 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 SLC22A18ASQ8N1D0 253 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 OR2L13Q8N349 312 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 BAHD1Q8TBE0 780 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 TEX47Q8TBZ9 253 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 GNPDA2Q8TDQ7 276 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 GPA33Q99795 319 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 ARHGDIGQ99819 225 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 GTPBP2Q9BX10 602 aaKnown RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 TSSK6Q9BXA6 273 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 POLDIP3Q9BY77 421 aaKnown RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 C6orf62Q9GZU0 229 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 MMP27Q9H306 513 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 TCEAL2Q9H3H9 227 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 NTMQ9P121 344 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 WDR45Q9Y484 360 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 A0A1B0GVT2 93 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 PRKYO43930 277 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 ADRA2AP08913 450 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 BMP4P12644 408 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 GRK5P34947 590 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 HOXC5Q00444 222 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 ZNF91Q05481 1191 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 LARS2Q15031 903 aaKnown RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 HEPHL1Q6MZM0 1159 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 PLEKHM3Q6ZWE6 761 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 ABI3BPQ7Z7G0 1075 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 CLIP4Q8N3C7 705 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 FAM26EQ8N5C1 309 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 DRAXINQ8NBI3 349 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 SNRNP27Q8WVK2 155 aaKnown RBP11.28□□□□□ -0.6
HMGCL-202ENST00000374487 LRR1Q96L50 414 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 CCDC3Q9BQI4 270 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 DSN1Q9H410 356 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 LYRM4Q9HD34 91 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 CLCA2Q9UQC9 943 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 PCDHGA5Q9Y5G8 931 aa11.28□□□□□ -0.6
HMGCL-202ENST00000374487 KIR2DS5A0A0G2JLQ3 304 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 A0A0G2JNG1 304 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 A0A0J9YY10 115 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 FAM221BA6H8Z2 402 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 OR5K4A6NMS3 321 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 KIR2DS3K7RE56 304 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.6
HMGCL-202ENST00000374487 KHNYNO15037 678 aaKnown RBP11.27□□□□□ -0.6
HMGCL-202ENST00000374487 LDB3O75112 727 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 HNRNPCP07910 306 aaKnown RBP eCLIP11.27□□□□□ -0.6
HMGCL-202ENST00000374487 CKMT1AP12532 417 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 PSMD7P51665 324 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 RHAGQ02094 409 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 RELAQ04206 551 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 KIR2DS5Q14953 304 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 SPHARQ15513 63 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 TRMT12Q53H54 448 aaKnown RBP11.27□□□□□ -0.6
HMGCL-202ENST00000374487 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.6
HMGCL-202ENST00000374487 PERM1Q5SV97 790 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 PEAR1Q5VY43 1037 aaPredicted RBP11.27□□□□□ -0.6
HMGCL-202ENST00000374487 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 ARMC6Q6NXE6 501 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 SLC27A4Q6P1M0 643 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 OOSP2Q86WS3 158 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 SIMC1Q8NDZ2 872 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 PIGXQ8TBF5 258 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 SLC37A2Q8TED4 501 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 DACH2Q96NX9 599 aa11.27□□□□□ -0.6
HMGCL-202ENST00000374487 MCHR1Q99705 422 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms