RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PRKAR1BP31321 381 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 SMSP52788 366 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 SLC27A4Q6P1M0 643 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 B3GLCTQ6Y288 498 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 ABCA7Q8IZY2 2146 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 COX18Q8N8Q8 333 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 ZDHHC1Q8WTX9 485 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 HCN3Q9P1Z3 774 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 CAB39Q9Y376 341 aaPredicted RBP14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 SMIM30A4D0T7 59 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 GALR3O60755 368 aaPredicted RBP14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 PIPP12273 146 aaPredicted RBP14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 CD79BP40259 229 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 SEPHS1P49903 392 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 DCST2Q5T1A1 773 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 PRAMEF8Q5VWM4 474 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 PRAMEF7Q5VXH5 474 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 CA13Q8N1Q1 262 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 OR4Q3Q8NH05 313 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 PIGXQ8TBF5 258 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 TPK1Q9H3S4 243 aa14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 MTHFD2LQ9H903 347 aaPredicted RBP14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 YARS2Q9Y2Z4 477 aaKnown RBP14.89□□□□□ -0.03
CNKSR1-202ENST00000374253 A0A0A6YYC8 382 aaPredicted RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 I3L1I5 382 aaPredicted RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 HRKO00198 91 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 MYL12BO14950 172 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 UBXN7O94888 489 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 MED26O95402 600 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 ZNF10P21506 573 aaPredicted RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 CDH3P22223 829 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 GABRA3P34903 492 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 UGT2B10P36537 528 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 TUBA1BP68363 451 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 MAT1AQ00266 395 aaKnown RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 ARHGAP11BQ3KRB8 267 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 FHL5Q5TD97 284 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 CD300LDQ6UXZ3 194 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 TUBA1AQ71U36 451 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 FAM26EQ8N5C1 309 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 AMER2Q8N7J2 671 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 KBTBD8Q8NFY9 601 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 GNPDA2Q8TDQ7 276 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 TAPBPLQ9BX59 468 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 C19orf53Q9UNZ5 99 aaPredicted RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 DMDP11532 3685 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 FRYLO94915 3013 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 FUOMA2VDF0 154 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 OR5K3A6NET4 321 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 SLC9B1P1A6NJY1 282 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 TBX1O43435 398 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 GPR75O95800 540 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 HTR2AP28223 471 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 GTF2E2P29084 291 aaKnown RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 MXD1Q05195 221 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 TSPAN31Q12999 210 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 LARS2Q15031 903 aaKnown RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 NCF4Q15080 339 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 CCDC85BQ15834 202 aaPredicted RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 NNATQ16517 81 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 OCLNQ16625 522 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 NDUFA9Q16795 377 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 FLYWCH1Q4VC44 716 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 MRPL2Q5T653 305 aaKnown RBP14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 HSDL2Q6YN16 418 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 WDR88Q6ZMY6 472 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 ZFP41Q8N8Y5 198 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 BBS1Q8NFJ9 593 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 RNFT2Q96EX2 444 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 LRRC61Q9BV99 259 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 MAT2BQ9NZL9 334 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 ZNF232Q9UNY5 417 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 B3GNT3Q9Y2A9 372 aa14.88□□□□□ -0.03
CNKSR1-202ENST00000374253 COL6A3P12111 3177 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 SEC16AO15027 2179 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 FAM183AA6NL82 134 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 PRKNO60260 465 aaPredicted RBP14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 SCG5P05408 212 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 ALOX5P09917 674 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 MAGEA8P43361 318 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 ZNF136P52737 540 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 LIMK1P53667 647 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 SLC13A2Q13183 592 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 ARMC6Q6NXE6 501 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 RNF44Q7L0R7 432 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 OOSP2Q86WS3 158 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 NANOGP1Q8N7R0 232 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 FAM83FQ8NEG4 500 aaPredicted RBP14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 OR4N2Q8NGD1 307 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 PFN4Q8NHR9 129 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 ZFPM2Q8WW38 1151 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 GATAD2BQ8WXI9 593 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 MND1Q9BWT6 205 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 ATP13A2Q9NQ11 1180 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 TRPV5Q9NQA5 729 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 WDR70Q9NW82 654 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 PTGFRNQ9P2B2 879 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 CA14Q9ULX7 337 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 KLK4Q9Y5K2 254 aa14.87□□□□□ -0.03
CNKSR1-202ENST00000374253 CSNK1G3Q9Y6M4 447 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms