RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 OR5M3Q8NGP4 307 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 OSTF1Q92882 214 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 LRIG1Q96JA1 1093 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 ARHGDIGQ99819 225 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 FOLH1BQ9HBA9 442 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 CYSLTR2Q9NS75 346 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 ABT1Q9ULW3 272 aaKnown RBP15.33■□□□□ 0.04
SDC4-201ENST00000372733 IRAK3Q9Y616 596 aa15.33■□□□□ 0.04
SDC4-201ENST00000372733 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
SDC4-201ENST00000372733 MAN2B1O00754 1011 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 SRP9P49458 86 aaKnown RBP15.32■□□□□ 0.04
SDC4-201ENST00000372733 BTG1P62324 171 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 MESP2Q0VG99 397 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 RNASE12Q5GAN4 147 aaKnown RBP15.32■□□□□ 0.04
SDC4-201ENST00000372733 TOR2AQ5JU69 321 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 ZBTB37Q5TC79 503 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 SDE2Q6IQ49 451 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 ZNF620Q6ZNG0 422 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 PLEKHM3Q6ZWE6 761 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 NACC2Q96BF6 587 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 CNRIP1Q96F85 164 aaPredicted RBP15.32■□□□□ 0.04
SDC4-201ENST00000372733 CAMK1GQ96NX5 476 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 PIGUQ9H490 435 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 OSGEPL1Q9H4B0 414 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 MED20Q9H944 212 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.32■□□□□ 0.04
SDC4-201ENST00000372733 PHF11Q9UIL8 331 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 RFPL3O75679 317 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 THY1P04216 161 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 LAG3P18627 525 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 TBXA2RP21731 343 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 FPR3P25089 353 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 SHC1P29353 583 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 CSNK1G2P78368 415 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 ST3GAL3Q11203 375 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 BICRALQ6AI39 1079 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 HBMQ6B0K9 141 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 KRT74Q7RTS7 529 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 AMZ2Q86W34 360 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 GPR135Q8IZ08 494 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 TMEM99Q8N816 258 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 BMPERQ8N8U9 685 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 LINC01555Q8NAE3 123 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 OR8K5Q8NH50 307 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 TMEM255BQ8WV15 326 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 HSD17B8Q92506 261 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 SAMD8Q96LT4 415 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 MENTQ9BUN1 341 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.32■□□□□ 0.04
SDC4-201ENST00000372733 B3GNT2Q9NY97 397 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 ZNF624Q9P2J8 865 aaPredicted RBP15.32■□□□□ 0.04
SDC4-201ENST00000372733 ZNF222Q9UK12 451 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 MAFFQ9ULX9 164 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 MGAT4AQ9UM21 535 aa15.32■□□□□ 0.04
SDC4-201ENST00000372733 HOXB3P14651 431 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 TALDO1P37837 337 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 GCGRP47871 477 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 MTNR1BP49286 362 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 WDR45BQ5MNZ6 344 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 LRRC28Q86X40 367 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 GHDCQ8N2G8 530 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 OR5K2Q8NHB8 316 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 ZNF431Q8TF32 576 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 ACOT12Q8WYK0 555 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 OR7D2Q96RA2 312 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 UBL7Q96S82 380 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 ZFP64Q9NPA5 681 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 ADAM29Q9UKF5 820 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 GPR34Q9UPC5 381 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 RASD1Q9Y272 281 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 ATG4BQ9Y4P1 393 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 HEATR5BQ9P2D3 2071 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 LOC105371267A0A1B0GV96 52 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 CDC42EP2O14613 210 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 MOSPD3O75425 235 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 DRD2P14416 443 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 THBS2P35442 1172 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 AHRP35869 848 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 MC3RP41968 323 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 PER3P56645 1201 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 RGS8P57771 180 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 STXBP1P61764 594 aaKnown RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 GNA13Q14344 377 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 NTRK2Q16620 822 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 TCEAL5Q5H9L2 206 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 C6orf132Q5T0Z8 1188 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 PLBD1Q6P4A8 553 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 CXXC5Q7LFL8 322 aaKnown RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 LRRC17Q8N6Y2 441 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 ACOT11Q8WXI4 607 aaPredicted RBP15.31■□□□□ 0.04
SDC4-201ENST00000372733 GPR137Q96N19 417 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 DHRS9Q9BPW9 319 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 ZBP1Q9H171 429 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 NARFLQ9H6Q4 476 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 SYNDIG1Q9H7V2 258 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 NT5DC2Q9H857 520 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 SLCO1C1Q9NYB5 712 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 IL20Q9NYY1 176 aa15.31■□□□□ 0.04
SDC4-201ENST00000372733 H2AFY2Q9P0M6 372 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms