RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MYL12AP19105 171 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 TNFRSF1BP20333 461 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 UQCRC2P22695 453 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 IFNA8P32881 189 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 ACTR1BP42025 376 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 XKP51811 444 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 WNT4P56705 351 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 DSTNP60981 165 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 ACTR1AP61163 376 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 DAB2P98082 770 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 DOC2BQ14184 412 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 MZT2AQ6P582 158 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 ANGPTL8Q6UXH0 198 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 HDDC2Q7Z4H3 204 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 C11orf96Q7Z7L8 435 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 AMZ2Q86W34 360 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 GKN2Q86XP6 184 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 NRROSQ86YC3 692 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 LRRC56Q8IYG6 542 aaPredicted RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 CADM2Q8N3J6 435 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 EID2Q8N6I1 236 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 OR7G3Q8NG95 312 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 UBASH3BQ8TF42 649 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 SKA2Q8WVK7 121 aaPredicted RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 DNAJA4Q8WW22 397 aaPredicted RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 SNAPC3Q92966 411 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 TRMT61AQ96FX7 289 aaKnown RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF514Q96K75 400 aaPredicted RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 MTERF1Q99551 399 aaKnown RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 KCNJ15Q99712 375 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 GSDMCQ9BYG8 508 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 ATG10Q9H0Y0 220 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 DPEP2Q9H4A9 486 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 CLEC2DQ9UHP7 191 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 ACAD8Q9UKU7 415 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 EXOSC1Q9Y3B2 195 aaKnown RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 SF3B6Q9Y3B4 125 aaKnown RBP10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 LAMA1P25391 3075 aa10.74□□□□□ -0.69
TSPAN1-201ENST00000372003 TRBV23OR9-2A0A075B6M9 112 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 LOC105371267A0A1B0GV96 52 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TRDV1A0A1B0GX56 115 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 PIPSLA2A3N6 862 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 E7EQ34 232 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 M0R129 80 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 SH3BP5O60239 455 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TBX19O60806 448 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CPNE3O75131 537 aaKnown RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 C6orf47O95873 294 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 RECKO95980 971 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CATP04040 527 aaKnown RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 H1F0P07305 194 aaKnown RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF883P0CG24 379 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 SLC2A2P11168 524 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CD59P13987 128 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 GABRA5P31644 462 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CHI3L1P36222 383 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 PLA2G5P39877 138 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 PRLHRP49683 370 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 RAB40BQ12829 278 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 NFE2L1Q14494 772 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF385BQ569K4 471 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 FAM71E1Q6IPT2 247 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 AGTRAPQ6RW13 159 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 PRICKLE2Q7Z3G6 844 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 SFTPA2Q8IWL1 248 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CFAP206Q8IYR0 622 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 GHDCQ8N2G8 530 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 RNF175Q8N4F7 328 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 FBXO15Q8NCQ5 510 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 OR52I1Q8NGK6 324 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 HUS1BQ8NHY5 278 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 GPBAR1Q8TDU6 330 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 RHBDD1Q8TEB9 315 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CREB3L1Q96BA8 519 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CAMK1GQ96NX5 476 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 IL4I1Q96RQ9 567 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TMEM43Q9BTV4 400 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 FOLH1BQ9HBA9 442 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TAAR2Q9P1P5 351 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 STOX2Q9P2F5 926 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 KCNN3Q9UGI6 736 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ALG5Q9Y673 324 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 WDR87Q6ZQQ6 2873 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 LYRM1O43325 122 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 SLC19A2O60779 497 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ETHE1O95571 254 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 GIMD1P0DJR0 217 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 MYF5P13349 255 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ELAVL4P26378 380 aaKnown RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 POU1F1P28069 291 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 EFNB1P98172 346 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ACSM1Q08AH1 577 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 MRPL28Q13084 256 aaKnown RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 DSG2Q14126 1118 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TMEM44Q2T9K0 475 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 HACD4Q5VWC8 232 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 LIPKQ5VXJ0 399 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms