RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 DCAF7P61962 342 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 ISXQ2M1V0 245 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 EXOC3L2Q2M3D2 409 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 KDM4DQ6B0I6 523 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 MRPL14Q6P1L8 145 aaKnown RBP24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 ZNF321PQ8N8H1 164 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 ATG16L2Q8NAA4 619 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 COL25A1Q9BXS0 654 aaPredicted RBP24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 IRF2BPLQ9H1B7 796 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 TMEFF2Q9UIK5 374 aaPredicted RBP24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 CHST2Q9Y4C5 530 aa24.36■■□□□ 1.49
ATPAF1-202ENST00000371937 FOXD2O60548 495 aaPredicted RBP24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 SEMA7AO75326 666 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 UGT2B17O75795 530 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 DAPP51397 102 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 EEF1A1P68104 462 aaKnown RBP24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 CDCP2Q5VXM1 449 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 FAAH2Q6GMR7 532 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 FAHD1Q6P587 224 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 ZNF836Q6ZNA1 936 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 ANKRD37Q7Z713 158 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 CLIP4Q8N3C7 705 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 DHRS1Q96LJ7 313 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 SPSB2Q99619 263 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 ZPBPQ9BS86 351 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 LRFN3Q9BTN0 628 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 NUDT9Q9BW91 350 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 TOR3AQ9H497 397 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 RHCGQ9UBD6 479 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 OR6C76A6NM76 312 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 H1F0P07305 194 aaKnown RBP24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 DRD5P21918 477 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 SLC5A2P31639 672 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 MAPK14Q16539 360 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 ZIK1Q3SY52 487 aaPredicted RBP24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 RNF220Q5VTB9 566 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 LCN10Q6JVE6 187 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 RAB11FIP2Q7L804 512 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 GATA6Q92908 595 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 LIN37Q96GY3 246 aaPredicted RBP24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 PRRC1Q96M27 445 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 ALPK1Q96QP1 1244 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 TMCC3Q9ULS5 477 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 A4GNTQ9UNA3 340 aa24.35■■□□□ 1.49
ATPAF1-202ENST00000371937 PEX12O00623 359 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 ANXA8P13928 327 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 CDH2P19022 906 aaPredicted RBP24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 PSMD4P55036 377 aaKnown RBP24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 RGS8P57771 180 aaPredicted RBP24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 ADARB1P78563 741 aaKnown RBP24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 TTC23Q5W5X9 447 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 ANKRD34AQ69YU3 496 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 BCORP1Q8N888 145 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 PIK3C3Q8NEB9 887 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 OR10G2Q8NGC3 310 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 LCORQ96JN0 433 aaPredicted RBP24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 CRB3Q9BUF7 120 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 FNDC11Q9BVV2 318 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 EVA1AQ9H8M9 152 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 RLIMQ9NVW2 624 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 UBAP1Q9NZ09 502 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 KCNE5Q9UJ90 142 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 PCDHGA10Q9Y5H3 936 aa24.34■■□□□ 1.49
ATPAF1-202ENST00000371937 C2orf92A0A1B0GVN3 265 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 IGKV1D-16P01601 117 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 ITIH1P19827 911 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 IFNA8P32881 189 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 PIN1Q13526 163 aaPredicted RBP24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 NNATQ16517 81 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 DECR1Q16698 335 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 HLA-DQA1Q5Y7H0 255 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 ZNF555Q8NEP9 628 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 MR1Q95460 341 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 PSD2Q9BQI7 771 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 KRT84Q9NSB2 600 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 C19orf25Q9UFG5 118 aaPredicted RBP24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 MRTO4Q9UKD2 239 aaKnown RBP24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 OTOGLQ3ZCN5 2332 aa24.33■■□□□ 1.49
ATPAF1-202ENST00000371937 CENPVL1A0A0U1RR11 272 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 MAGEA13PA6NCF6 341 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 ARRDC5A6NEK1 342 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 FRG2CA6NGY1 282 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 C9J4A7 227 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 CNOT3O75175 753 aaKnown RBP24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 CCNB2O95067 398 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 MYF6P23409 242 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 FOXL2P58012 376 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 NPTX1Q15818 432 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 KRT80Q6KB66 452 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 UGT2A3Q6UWM9 527 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 SLC29A4Q7RTT9 530 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 ZAR1Q86SH2 424 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 PMEPA1Q969W9 287 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 ADIPOR1Q96A54 375 aa24.33■■□□□ 1.48
ATPAF1-202ENST00000371937 NPIPA5A0A0B4J1W7 369 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 A0A1W2PRQ8 180 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 NPIPA7E9PJI5 369 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 AP3D1O14617 1153 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 PCDH17O14917 1159 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms