RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PSMC3IPQ9P2W1 217 aaPredicted RBP11.86□□□□□ -0.51
RPF1-201ENST00000370654 FLNAP21333 2647 aaKnown RBP11.85□□□□□ -0.51
RPF1-201ENST00000370654 SLC22A20A6NK97 555 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 H3BML4 177 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 AQP8O94778 261 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 IL33O95760 270 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 GSTA1P08263 222 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 MYL2P10916 166 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 GABRA3P34903 492 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 SLC6A8P48029 635 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 BCL2A1Q16548 175 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 GRAMD1BQ3KR37 738 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 CYP27C1Q4G0S4 372 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 NOXRED1Q6NXP6 359 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 ZNF550Q7Z398 422 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 P4HA3Q7Z4N8 544 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 ZAR1Q86SH2 424 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 LCA5Q86VQ0 697 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 FNDC9Q8TBE3 224 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 C1GALT1C1Q96EU7 318 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 PGM2Q96G03 612 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 LMF2Q9BU23 707 aaKnown RBP11.85□□□□□ -0.51
RPF1-201ENST00000370654 PINK1Q9BXM7 581 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
RPF1-201ENST00000370654 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 MIEF1Q9NQG6 463 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 FBXO34Q9NWN3 711 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 STK38LQ9Y2H1 464 aa11.85□□□□□ -0.51
RPF1-201ENST00000370654 NAV3Q8IVL0 2385 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 MSTNO14793 375 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 CTIFO43310 598 aaKnown RBP11.84□□□□□ -0.51
RPF1-201ENST00000370654 PLIN3O60664 434 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 COQ9O75208 318 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 UTS2O95399 124 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 OPN1LWP04000 364 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 PEPDP12955 493 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 EFNA1P20827 205 aaPredicted RBP11.84□□□□□ -0.51
RPF1-201ENST00000370654 LOXP28300 417 aaPredicted RBP11.84□□□□□ -0.51
RPF1-201ENST00000370654 MAP3K8P41279 467 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 HSPB3Q12988 150 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 IMPG1Q17R60 797 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 TMEM44Q2T9K0 475 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 ANKRD34AQ69YU3 496 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 Q6ZSR9 355 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 IFT20Q8IY31 132 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 ZNF610Q8N9Z0 462 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 FBXO30Q8TB52 745 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 SMPDL3BQ92485 455 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 OTUB1Q96FW1 271 aaPredicted RBP11.84□□□□□ -0.51
RPF1-201ENST00000370654 MARK4Q96L34 752 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 RNF122Q9H9V4 155 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 DDX18Q9NVP1 670 aaKnown RBP11.84□□□□□ -0.51
RPF1-201ENST00000370654 FAM120CQ9NX05 1096 aaKnown RBP11.84□□□□□ -0.51
RPF1-201ENST00000370654 DCDC2Q9UHG0 476 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 GRID1Q9ULK0 1009 aa11.84□□□□□ -0.51
RPF1-201ENST00000370654 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 NPIPB8E9PQR5 432 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 AKAP10O43572 662 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 TNFRSF21O75509 655 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 RSL1D1O76021 490 aaKnown RBP11.83□□□□□ -0.52
RPF1-201ENST00000370654 CD79BP40259 229 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 GSTM5P46439 218 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 DIO3P55073 304 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 PON3Q15166 354 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 DECR1Q16698 335 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 GGNQ86UU5 652 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
RPF1-201ENST00000370654 GATSQ8NAP1 163 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 OR4C3Q8NH37 302 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 CLHC1Q8NHS4 586 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 NUDT8Q8WV74 236 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 HOXB13Q92826 284 aaPredicted RBP11.83□□□□□ -0.52
RPF1-201ENST00000370654 GIMAP5Q96F15 307 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 ZC3HAV1LQ96H79 300 aaKnown RBP11.83□□□□□ -0.52
RPF1-201ENST00000370654 FAM111AQ96PZ2 611 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 ACBD3Q9H3P7 528 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 Q9N2J8 555 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 BAIAP2L1Q9UHR4 511 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 ABCG2Q9UNQ0 655 aa11.83□□□□□ -0.52
RPF1-201ENST00000370654 IGLV3-32A0A0A0MS00 114 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 SMIM23A6NLE4 172 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 GLRA3O75311 464 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 SEC22BO75396 215 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 ANGPTL1O95841 491 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 ACP2P11117 423 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 FOSL1P15407 271 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 NTSP30990 170 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 UGT2B10P36537 528 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 DNAJB13P59910 316 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 PSPHP78330 225 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 NKX6-1P78426 367 aaPredicted RBP11.82□□□□□ -0.52
RPF1-201ENST00000370654 MRPS22P82650 360 aaKnown RBP11.82□□□□□ -0.52
RPF1-201ENST00000370654 MEIOBQ8N635 442 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 EPS8L3Q8TE67 593 aaKnown RBP11.82□□□□□ -0.52
RPF1-201ENST00000370654 SLC9A6Q92581 669 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 PIK3IP1Q96FE7 263 aa11.82□□□□□ -0.52
RPF1-201ENST00000370654 C16orf58Q96GQ5 468 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms