RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 COA4Q9NYJ1 87 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 KCNK7Q9Y2U2 307 aa15.19■□□□□ 0.02
CHD1L-203ENST00000369259 PCDHGA9Q9Y5G4 932 aaKnown RBP15.19■□□□□ 0.02
CHD1L-203ENST00000369259 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 A0A0G2JK05 382 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 A0A1B0GUH1 482 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 PRR23D1E9PI22 279 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 H7C2Y5 167 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 MID1O15344 667 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 GALR3O60755 368 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 PRR23D2P0DMB1 279 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 GABRA1P14867 456 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 ATP6V1E1P36543 226 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 FGL1Q08830 312 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 AADACL4Q5VUY2 407 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 THAP4Q8WY91 577 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 RAB8BQ92930 207 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 ZNF607Q96SK3 696 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 TM6SF2Q9BZW4 377 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 ISG20L2Q9H9L3 353 aaKnown RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 CA10Q9NS85 328 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 ACTR10Q9NZ32 417 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 CFAP97Q9P2B7 532 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 CLEC4AQ9UMR7 237 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 SIRT4Q9Y6E7 314 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 ANHXE9PGG2 379 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 M0R3H8 397 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 TYRP14679 529 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 PPP3CBP16298 524 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 VEGFCP49767 419 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 DEFA5Q01523 94 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 GK2Q14410 553 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 TMEM44Q2T9K0 475 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 FAM27D1Q5T7N8 215 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 SFRP4Q6FHJ7 346 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 SLC30A6Q6NXT4 461 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 AGTRAPQ6RW13 159 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 TMUB2Q71RG4 321 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 TSPAN33Q86UF1 283 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 MEX3DQ86XN8 651 aaKnown RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 ZDHHC1Q8WTX9 485 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 NEURL3Q96EH8 262 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 SEC22CQ9BRL7 303 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 IFT27Q9BW83 186 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 MTG2Q9H4K7 406 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 NANSQ9NR45 359 aa15.18■□□□□ 0.02
CHD1L-203ENST00000369259 TEX10Q9NXF1 929 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-203ENST00000369259 RFXAPO00287 272 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SAP18O00422 153 aaKnown RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 GSTZ1O43708 216 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 APOC1P02654 83 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 CTSHP09668 335 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 TAF12Q16514 161 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SLC25A35Q3KQZ1 300 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 FAM69AQ5T7M9 428 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 MED27Q6P2C8 311 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 FAM98AQ8NCA5 519 aaKnown RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 C7orf57Q8NEG2 295 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 YIPF4Q9BSR8 244 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SLC6A16Q9GZN6 736 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 OR10A4Q9H209 315 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 FN3KQ9H479 309 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 BABAM2Q9NXR7 383 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 NDRG3Q9UGV2 375 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 OTOFQ9HC10 1997 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 OR2M5A3KFT3 312 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 CHURC1-FNTBB4DL54 471 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 PGRMC2O15173 223 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 ITGA10O75578 1167 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 KLHL18O94889 574 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 H2AFB1P0C5Y9 115 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 ZDHHC11BP0C7U3 371 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 CPN1P15169 458 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 PSMB1P20618 241 aaKnown RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 PSMA6P60900 246 aaKnown RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SEC61A1P61619 476 aaKnown RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SIM1P81133 766 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 E2F1Q01094 437 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 LTB4RQ15722 352 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 CLEC12AQ5QGZ9 265 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 IER5LQ5T953 404 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 CDC73Q6P1J9 531 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 TRMT11Q7Z4G4 463 aaKnown RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SLC9B2Q86UD5 537 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 ASB12Q8WXK4 309 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 JAM3Q9BX67 310 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 GSDMCQ9BYG8 508 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 SLC19A3Q9BZV2 496 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 NKX6-2Q9C056 277 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-203ENST00000369259 MLXQ9UH92 298 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 CAMK2AQ9UQM7 478 aa15.17■□□□□ 0.02
CHD1L-203ENST00000369259 IGLV3-16A0A075B6K0 115 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 OR2A4O95047 310 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 HTR1FP30939 366 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 ATP5C1P36542 298 aaKnown RBP15.16■□□□□ 0.02
CHD1L-203ENST00000369259 GDNFP39905 211 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 CSNK1DP48730 415 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 OR5M10Q6IEU7 315 aa15.16■□□□□ 0.02
CHD1L-203ENST00000369259 MTFR2Q6P444 385 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms