RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MEX3DQ86XN8 651 aaKnown RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 NKAIN4Q8IVV8 208 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 FAM20CQ8IXL6 584 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 SYT14Q8NB59 555 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 GANCQ8TET4 914 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 DNAJA4Q8WW22 397 aaPredicted RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 HERVK_113Q902F9 699 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ZG16BQ96DA0 208 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ZNF649Q9BS31 505 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 PRR14Q9BWN1 585 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 FN3KQ9H479 309 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 PPP1R3EQ9H7J1 279 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 POLMQ9NP87 494 aaPredicted RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 ZDHHC4Q9NPG8 344 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 PTGFRNQ9P2B2 879 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 A0A1W2PS29 197 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 PLA2G10O15496 165 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 LATO43561 262 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 SLC19A2O60779 497 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 CHRM5P08912 532 aaPredicted RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 RCVRNP35243 200 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 DAB2P98082 770 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 TNFRSF17Q02223 184 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 TRIQKQ629K1 86 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 SLC30A6Q6NXT4 461 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ZNF322Q6U7Q0 402 aaPredicted RBP13.35□□□□□ -0.27
CD48-201ENST00000368045 ADGRD2Q7Z7M1 963 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 MARCH9Q86YJ5 346 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 NRMQ8IXM6 262 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 OR2L13Q8N349 312 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ENKURQ8TC29 256 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ACOT12Q8WYK0 555 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 KAT2AQ92830 837 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 SLC22A18Q96BI1 424 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ATF6BQ99941 703 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 APOOQ9BUR5 198 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 SLC17A9Q9BYT1 436 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 RERGLQ9H628 205 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 TNFRSF10DQ9UBN6 386 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 CBLCQ9ULV8 474 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 PLEKHM1Q9Y4G2 1056 aa13.35□□□□□ -0.27
CD48-201ENST00000368045 ISM1B1AKI9 464 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 GABRPO00591 440 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 THY1P04216 161 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
CD48-201ENST00000368045 CD53P19397 219 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 CPN2P22792 545 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 IGFALSP35858 605 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 GPR4P46093 362 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 MAP2K3P46734 347 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 EVX1P49640 407 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 RNF144AP50876 292 aaPredicted RBP13.34□□□□□ -0.27
CD48-201ENST00000368045 MRPS15P82914 257 aaKnown RBP13.34□□□□□ -0.27
CD48-201ENST00000368045 DUSP8Q13202 625 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 LTB4RQ15722 352 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 SHFQ7M4L6 423 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 ASPGQ86U10 573 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 RANBP3LQ86VV4 465 aaPredicted RBP13.34□□□□□ -0.27
CD48-201ENST00000368045 AMIGO1Q86WK6 493 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 RNF113BQ8IZP6 322 aaKnown RBP13.34□□□□□ -0.27
CD48-201ENST00000368045 SLC7A5P1Q8MH63 180 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 Q8N9G6 341 aaPredicted RBP13.34□□□□□ -0.27
CD48-201ENST00000368045 SIMC1Q8NDZ2 872 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 C19orf18Q8NEA5 215 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 OR4F15Q8NGB8 312 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 KLK6Q92876 244 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 MMP28Q9H239 520 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 WDR45Q9Y484 360 aa13.34□□□□□ -0.27
CD48-201ENST00000368045 NINQ8N4C6 2090 aa13.33□□□□□ -0.27
CD48-201ENST00000368045 LINC00854A0A1B0GVQ3 168 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 A0A1W2PQU0 124 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 CENPBD1B2RD01 187 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 J3QRE1 110 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 TFECO14948 347 aaPredicted RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 PLRG1O43660 514 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 FCMRO60667 390 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 LALBAP00709 142 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 HOXC4P09017 264 aaPredicted RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 PRKAR1AP10644 381 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 SOX18P35713 384 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 ATP6V1E1P36543 226 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 CD79BP40259 229 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 WASP42768 502 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 EEF1A1P68104 462 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 SUZ12Q15022 739 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 CDK10Q15131 360 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.28
CD48-201ENST00000368045 RPL13AP3Q6NVV1 102 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms