RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PLA2G15Q8NCC3 412 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 CREB3L1Q96BA8 519 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 ZNF649Q9BS31 505 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 MS4A8Q9BY19 250 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 HINT3Q9NQE9 182 aaKnown RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 B3GNT2Q9NY97 397 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 LIPT1Q9Y234 373 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 CHST2Q9Y4C5 530 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 LCMT2O60294 686 aaKnown RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 LILRB5O75023 590 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 MRPL3P09001 348 aaKnown RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 GIFP27352 417 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 SLC16A1P53985 500 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 VSX2P58304 361 aaPredicted RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 SHHQ15465 462 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 SLC25A35Q3KQZ1 300 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 SLC25A30Q5SVS4 291 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 PLBD1Q6P4A8 553 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 RPTNQ6XPR3 784 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 C17orf64Q86WR6 236 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 NRMQ8IXM6 262 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 KRT78Q8N1N4 520 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 TMEM99Q8N816 258 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 FBXO15Q8NCQ5 510 aaPredicted RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 DOK4Q8TEW6 326 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 TCEAL4Q96EI5 215 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 DPH7Q9BTV6 452 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 ZDHHC4Q9NPG8 344 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 AHSPQ9NZD4 102 aa12.72□□□□□ -0.37
PRKN-205ENST00000366897 MRPL15Q9P015 296 aaKnown RBP12.72□□□□□ -0.37
PRKN-205ENST00000366897 KDM4EB2RXH2 506 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 SOX1O00570 391 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 REM1O75628 298 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 HOXB3P14651 431 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 DRD5P21918 477 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 MMP12P39900 470 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 ZNF81P51508 661 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 SLC3A1Q07837 685 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 RAB33AQ14088 237 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 NDUFA9Q16795 377 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 LY6G5CQ5SRR4 150 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 NDUFAF5Q5TEU4 345 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 AADACL4Q5VUY2 407 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 FCRLBQ6BAA4 426 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 ZNF322Q6U7Q0 402 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 TMEM107Q6UX40 140 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 UBE3DQ7Z6J8 389 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 BPHLQ86WA6 291 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 OR13C5Q8NGS8 318 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 CEP76Q8TAP6 659 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 DNAJA4Q8WW22 397 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 AMDHD1Q96NU7 426 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 TNFRSF10DQ9UBN6 386 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 ING4Q9UNL4 249 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 HCFC2Q9Y5Z7 792 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 SNTNA6NMZ2 147 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 PGRMC2O15173 223 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 HOXA2O43364 376 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 PI15O43692 258 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 HRGP04196 525 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 UBL4AP11441 157 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 GPR1P46091 355 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 DSG2Q14126 1118 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 DUSP6Q16828 381 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 ZNF658BQ4V348 819 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 KLHL12Q53G59 568 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 CD300LDQ6UXZ3 194 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 TCEAL8Q8IYN2 117 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 IZUMO1Q8IYV9 350 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 TMEM255BQ8WV15 326 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 TTC9Q92623 222 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 SAMD8Q96LT4 415 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 BBS4Q96RK4 519 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 HCAR1Q9BXC0 346 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 OSGEPL1Q9H4B0 414 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 MRPS18AQ9NVS2 196 aaKnown RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 ELF5Q9UKW6 265 aaPredicted RBP12.71□□□□□ -0.37
PRKN-205ENST00000366897 CACNG2Q9Y698 323 aa12.71□□□□□ -0.37
PRKN-205ENST00000366897 TEX13CA0A0J9YWL9 993 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 CDC42EP2O14613 210 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 CCL16O15467 120 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.38
PRKN-205ENST00000366897 STOMP27105 288 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 TALDO1P37837 337 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 POGLUT1Q8NBL1 392 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 GCDHQ92947 438 aaPredicted RBP12.71□□□□□ -0.38
PRKN-205ENST00000366897 C12orf66Q96MD2 445 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 PIGUQ9H490 435 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 KLHL31Q9H511 634 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 IL36AQ9UHA7 158 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 SATB2Q9UPW6 733 aa12.71□□□□□ -0.38
PRKN-205ENST00000366897 WNT6Q9Y6F9 365 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms