RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CASC3O15234 703 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 PPP3CBP16298 524 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 MAT2AP31153 395 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 CBARPQ8N350 705 aaPredicted RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 TCTEX1D2Q8WW35 142 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 INIPQ9NRY2 104 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 NPIPA5E9PKD4 350 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 HCKP08631 526 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 GJA1P17302 382 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 LSSP48449 732 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 TMEM41AQ96HV5 264 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 ZNF582Q96NG8 517 aaPredicted RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 FN3KQ9H479 309 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 PNO1Q9NRX1 252 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 NDRG4Q9ULP0 352 aaKnown RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 NPIPA1Q9UND3 350 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 A0A1W2PPL8 197 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 INPPL1O15357 1258 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 SPARCP09486 303 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 SBK3P0C264 359 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 ADH5P11766 374 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 GPR143P51810 404 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 ILF3Q12906 894 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■■■□ 24
SMC5-201ENST00000361138 VASH1Q7L8A9 365 aaPredicted RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 OR4E2Q8NGC2 313 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 MRI1Q9BV20 369 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 ZNF385DQ9H6B1 395 aa13.19□□□□□ -0.3
SMC5-201ENST00000361138 ZNF334Q9HCZ1 680 aaPredicted RBP13.19□□□□□ -0.3
SMC5-201ENST00000361138 TGM1P22735 817 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 EIF2S3P41091 472 aaKnown RBP13.18□□□□□ -0.3
SMC5-201ENST00000361138 TMEM35AQ53FP2 167 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PGBD5Q8N414 524 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 OR4F15Q8NGB8 312 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 MFSD8Q8NHS3 518 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 TCEAL3Q969E4 200 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PHB2Q99623 299 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PPM1BO75688 479 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 AKAIN1P0CW23 69 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 OR13C3Q8NGS6 347 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 OR4K13Q8NH42 304 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PMM1Q92871 262 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 SLC25A46Q96AG3 418 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 SGTBQ96EQ0 304 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 CARS2Q9HA77 564 aaKnown RBP13.18□□□□□ -0.3
SMC5-201ENST00000361138 POT1Q9NUX5 634 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 ABRACLQ9P1F3 81 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 CLEC2LP0C7M8 214 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 S1PR1P21453 382 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 EMP3P54852 163 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 NDUFAF5Q5TEU4 345 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 ALKAL1Q6UXT8 129 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PXKQ7Z7A4 578 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 BOLLQ8N9W6 283 aaKnown RBP13.18□□□□□ -0.3
SMC5-201ENST00000361138 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 TNFRSF12AQ9NP84 129 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 INPP5EQ9NRR6 644 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
SMC5-201ENST00000361138 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 PEX14O75381 377 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 RAP2BP61225 183 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 CTF1Q16619 201 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 SLX4IPQ5VYV7 408 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 RBM23Q86U06 439 aaKnown RBP13.18□□□□□ -0.3
SMC5-201ENST00000361138 OR52I1Q8NGK6 324 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 ZNF416Q9BWM5 594 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 ACTRT3Q9BYD9 372 aa13.18□□□□□ -0.3
SMC5-201ENST00000361138 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
SMC5-201ENST00000361138 GPR39O43194 453 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 LATS1O95835 1130 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 ADRB3P13945 408 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 SEC13P55735 322 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 DECR1Q16698 335 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 C3orf58Q8NDZ4 430 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 PHOSPHO1Q8TCT1 267 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 DOK1Q99704 481 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 PELI2Q9HAT8 420 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 TMEM184CQ9NVA4 438 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 ELOVL2Q9NXB9 296 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 KCNK6Q9Y257 313 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 SLC31A1O15431 190 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 HBA1P69905 142 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 HBMQ6B0K9 141 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 ALKAL2Q6UX46 152 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 MEPCEQ7L2J0 689 aaKnown RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 METTL21AQ8WXB1 218 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 DEFB118Q96PH6 123 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 TBL1XR1Q9BZK7 514 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 MEPEQ9NQ76 525 aaPredicted RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 TRAV18A0A075B6X5 111 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms