RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 RNF170Q96K19 258 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 KCNA7Q96RP8 456 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM181Q9P2C4 612 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 DFFBO76075 338 aa8.84□□□□□ -1
VPS13A-203ENST00000360280 APOBEC3HQ6NTF7 200 aaKnown RBP8.84□□□□□ -1
VPS13A-203ENST00000360280 OR4E2Q8NGC2 313 aa8.84□□□□□ -1
VPS13A-203ENST00000360280 MEIOCA2RUB1 952 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TGM5O43548 720 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 METTL15P1P0C7V9 234 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PKLRP30613 574 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 CERS5Q8N5B7 392 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 MRIQ9BWK5 157 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 OR11A1Q9GZK7 315 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 NSUN3Q9H649 340 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 ADM5C9JUS6 153 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ARHGAP1Q07960 439 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.83□□□□□ -1
VPS13A-203ENST00000360280 CPED1A4D0V7 1026 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 YJEFN3A6XGL0 299 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 EGFP01133 1207 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TYRP14679 529 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 NFYBP25208 207 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 OR6F1Q8NGZ6 308 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 OR2M2Q96R28 347 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ARHGAP9Q9BRR9 750 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 NMNAT2Q9BZQ4 307 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PROS1P07225 676 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TIA1P31483 386 aaKnown RBP eCLIP8.83□□□□□ -1
VPS13A-203ENST00000360280 OPRL1P41146 370 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 DBPQ10586 325 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 PRAMEF19Q5SWL8 479 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 HRH4Q9H3N8 390 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PEAK1Q9H792 1746 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PNPP00491 289 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 AHSGP02765 367 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 SFRP5Q5T4F7 317 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ABHD12BQ7Z5M8 362 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 SHDQ96IW2 340 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PIGVQ9NUD9 493 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 UFSP2Q9NUQ7 469 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 SLC17A6Q9P2U8 582 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 RFXAPO00287 272 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 RAET1LQ5VY80 246 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TMEM107Q6UX40 140 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TPRG1Q6ZUI0 275 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 KANSL1Q7Z3B3 1105 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 GIMAP1Q8WWP7 306 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 WASH6PQ9NQA3 447 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 FBXL12Q9NXK8 326 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 CPNE7Q9UBL6 633 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 CXorf49A8MYA2 514 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 CST3P01034 146 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 GGT1P19440 569 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 CRYZQ08257 329 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 PRR18Q8N4B5 295 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ALPIP09923 528 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 DAP3P51398 398 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 RPS15AP62244 130 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 RCAN2Q14206 197 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PCK2Q16822 640 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ATPAF1Q5TC12 328 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 IL17RDQ8NFM7 739 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 PATZ1Q9HBE1 687 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 LOC285095A0A1B0GVY8 99 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 C6orf136Q5SQH8 315 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 BOLLQ8N9W6 283 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 OR51B5Q9H339 312 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 SMOC2Q9H3U7 446 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 GJD2Q9UKL4 321 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ITGB5P18084 799 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 CXCL9Q07325 125 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TATDN3Q17R31 274 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TTLL10Q6ZVT0 673 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 OR2A12Q8NGT7 310 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 MSLNLQ96KJ4 702 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 ADAMTS6Q9UKP5 1117 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 LOC730098B7Z3J9 87 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 F6UZH7 168 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 GRPRP30550 384 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 EIF2DP41214 584 aaKnown RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 ZNF776Q68DI1 518 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 SBSNQ6UWP8 590 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 HIST2H3AQ71DI3 136 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 LILRB4Q8NHJ6 448 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 C11orf84Q9BUA3 381 aaPredicted RBP8.83□□□□□ -1
VPS13A-203ENST00000360280 MOB1AQ9H8S9 216 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 SMOXQ9NWM0 555 aa8.83□□□□□ -1
VPS13A-203ENST00000360280 TAS2R19P59542 299 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 TAP2Q03519 686 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 COX15Q7KZN9 410 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 DEFB126Q9BYW3 111 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 CCDC85CA6NKD9 419 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 DPM1O60762 260 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OLFM2O95897 454 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 C8AP07357 584 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SNU13P55769 128 aaKnown RBP8.82□□□□□ -1
VPS13A-203ENST00000360280 RUNX2Q13950 521 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 OR4K1Q8NGD4 311 aa8.82□□□□□ -1
VPS13A-203ENST00000360280 SGK3Q96BR1 496 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms