RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 LCATP04180 440 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 RORAP35398 523 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 SLC10A2Q12908 348 aaPredicted RBP15.2■□□□□ 0.02
COL18A1-203ENST00000359759 AGAP7PQ5VUJ5 663 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 AGAP6Q5VW22 663 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 OR4N4Q8N0Y3 316 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 OR2T4Q8NH00 348 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 DAZLQ92904 295 aaKnown RBP15.2■□□□□ 0.02
COL18A1-203ENST00000359759 AGAP4Q96P64 663 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 RNF32Q9H0A6 362 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 TP53TG5Q9Y2B4 290 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 H3BML4 177 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 MT-CO2P00403 227 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 AFF3P51826 1226 aaKnown RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF551Q7Z340 670 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 NAGSQ8N159 534 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 OR5D16Q8NGK9 328 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 OR14L1PQ8NHC6 308 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 THAP7Q9BT49 309 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 NPIPA5A0A0B4J1W7 369 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 NPIPA7E9PJI5 369 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 H0Y8G0 127 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 SGCEO43556 437 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 PABPC4LP0CB38 370 aaKnown RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 NPIPA8P0DM63 369 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 SH3BP2P78314 561 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 GRM7Q14831 915 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 TMPRSS7Q7RTY8 843 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 GDPD1Q8N9F7 314 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 SNX18Q96RF0 628 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 MFFQ9GZY8 342 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 GPN2Q9H9Y4 310 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 USP36Q9P275 1121 aaKnown RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 PENKP01210 267 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 KBTBD6Q86V97 674 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 IL22RA1Q8N6P7 574 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 UHRF1Q96T88 793 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 PDE7BQ9NP56 450 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 INSL6Q9Y581 213 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 OSMP13725 252 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 GTDC1Q4AE62 458 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF585AQ6P3V2 769 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 IRF7Q92985 503 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 ACOT13Q9NPJ3 140 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 AKAIN1P0CW23 69 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 LAMP1P11279 417 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 APEHP13798 732 aaKnown RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 MAMDC2Q7Z304 686 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 C12orf45Q8N5I9 185 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 PAPD5Q8NDF8 572 aaKnown RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 ADAMTS19Q8TE59 1207 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF578Q96N58 590 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-203ENST00000359759 GPR174Q9BXC1 333 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 OR51J1Q9H342 316 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 SLC6A5Q9Y345 797 aa15.19■□□□□ 0.02
COL18A1-203ENST00000359759 DVL2O14641 736 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 IL1RNP18510 177 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 SOX9P48436 509 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 WDR45BQ5MNZ6 344 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 PIP5KL1Q5T9C9 394 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 TM9SF4Q92544 642 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF160Q9HCG1 818 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 PREX1Q8TCU6 1659 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 A0A0U1RQF3 1178 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 C7P10643 843 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 MAGEB1P43366 347 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 FBXW12Q6X9E4 464 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 CMTM1Q8IZ96 169 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 IL1F10Q8WWZ1 152 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 SHDQ96IW2 340 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 KCNK13Q9HB14 408 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 TMEM181Q9P2C4 612 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 A0A1B0GVG6 124 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 ZIC2O95409 532 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-203ENST00000359759 PITX1P78337 314 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-203ENST00000359759 RCAN2Q14206 197 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 MBTPS1Q14703 1052 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 IMP4Q96G21 291 aaKnown RBP15.18■□□□□ 0.02
COL18A1-203ENST00000359759 CD300LBA8K4G0 201 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 GPR50Q13585 617 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 RAB31Q13636 194 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 IL20RBQ6UXL0 311 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 OR4K5Q8NGD3 323 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 RHEBL1Q8TAI7 183 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 COPS3Q9UNS2 423 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 TPT1P13693 172 aaKnown RBP15.18■□□□□ 0.02
COL18A1-203ENST00000359759 ACPPP15309 386 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 JUNDP17535 347 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 GPRIN1Q7Z2K8 1008 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 TSPYL5Q86VY4 417 aaPredicted RBP15.18■□□□□ 0.02
COL18A1-203ENST00000359759 CPOQ8IVL8 374 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 MFSD6LQ8IWD5 586 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 ZFP90Q8TF47 636 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 SLC38A1Q9H2H9 487 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 THSD1Q9NS62 852 aa15.18■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF736B4DX44 427 aaPredicted RBP15.17■□□□□ 0.02
COL18A1-203ENST00000359759 SULT1C2O00338 296 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms