RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CSTF1Q05048 431 aaKnown RBP10.48□□□□□ -0.73
SSU72-202ENST00000359060 FGL2Q14314 439 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 KIR2DS3Q14952 304 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 TBC1D25Q3MII6 688 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 OAFQ86UD1 273 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 SFXN5Q8TD22 340 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 PEX11GQ96HA9 241 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 SERINC2Q96SA4 455 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 AKIP1Q9NQ31 210 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 SIRT3Q9NTG7 399 aaPredicted RBP10.48□□□□□ -0.73
SSU72-202ENST00000359060 C2orf92A0A1B0GVN3 265 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 FFAR1O14842 300 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 UBXN7O94888 489 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 LGI1O95970 557 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 FBXW4P57775 412 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 HHEXQ03014 270 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 ZNF517Q6ZMY9 492 aaPredicted RBP10.48□□□□□ -0.73
SSU72-202ENST00000359060 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
SSU72-202ENST00000359060 OR5T3Q8NGG3 340 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 OR51L1Q8NGJ5 315 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 ZNF563Q8TA94 476 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 SLIRPQ9GZT3 109 aaKnown RBP10.48□□□□□ -0.73
SSU72-202ENST00000359060 USP34Q70CQ2 3546 aa10.48□□□□□ -0.73
SSU72-202ENST00000359060 A0A1W2PPK0 400 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 A0A1W2PRQ8 180 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 UNC119BA6NIH7 251 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TSC22D2O75157 780 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 GPX5O75715 221 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 BLKP51451 505 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
SSU72-202ENST00000359060 RAB30Q15771 203 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 AMZ1Q400G9 498 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ZFP69Q49AA0 526 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TRMT12Q53H54 448 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 LRRC56Q8IYG6 542 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 C11orf24Q96F05 449 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 KLHDC7BQ96G42 594 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 SPACA7Q96KW9 195 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ZNF582Q96NG8 517 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 SEMA4GQ9NTN9 838 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 CPNE7Q9UBL6 633 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 A0A0A6YYD5 115 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 TRAPPC13A5PLN9 417 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 HLA-DQA2P01906 255 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 THEGLP0DJG4 465 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 PRKAR1AP10644 381 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 SLC2A2P11168 524 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 PSKH1P11801 424 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 CPMP14384 443 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 PXNP49023 591 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 RHAGQ02094 409 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 SYT14P1Q58G82 188 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 LCN1P1Q5VSP4 162 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 SPATC1Q76KD6 591 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TMEM255BQ8WV15 326 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 MMABQ96EY8 250 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 DGAT2Q96PD7 388 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 CDCA3Q99618 268 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 KCNN2Q9H2S1 579 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 YARS2Q9Y2Z4 477 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 A0A0A6YYC8 382 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 PRAMEF25A6NGN4 478 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 C12orf71A8MTZ7 269 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 I3L1I5 382 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 SULT1C4O75897 302 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 CLEC2LP0C7M8 214 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 CD6P30203 668 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 EIF2DP41214 584 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 PCBP4P57723 403 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 TSPAN31Q12999 210 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 BIKQ13323 160 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ASB18Q6ZVZ8 466 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 UBE3DQ7Z6J8 389 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ACBD7Q8N6N7 88 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TP53I13Q8NBR0 393 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 OR4D11Q8NGI4 311 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TMEM163Q8TC26 289 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 NR4A3Q92570 626 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 POLDIP3Q9BY77 421 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 CHST8Q9H2A9 424 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 KIR3DX1Q9H7L2 352 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 MED20Q9H944 212 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 PRDM7Q9NQW5 492 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 PNO1Q9NRX1 252 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 TAS2R7Q9NYW3 318 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 FBXL21Q9UKT6 434 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ZNF443Q9Y2A4 671 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 A0A1W2PPV9 198 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 A8MU76 341 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 HCN1O60741 890 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 HOXB9P17482 250 aaPredicted RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 ACVR2AP27037 513 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TRIM23P36406 574 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ACVR1BP36896 505 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 RPS19P39019 145 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 TGM4P49221 684 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TNFRSF17Q02223 184 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms