RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GRPRP30550 384 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PCGF2P35227 344 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 BMPR1AP36894 532 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SNU13P55769 128 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 SRYQ05066 204 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PON2Q15165 354 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ZNF423Q2M1K9 1284 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PLBD1Q6P4A8 553 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 MAMDC4Q6UXC1 1216 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ZNF767PQ75MW2 155 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NRMQ8IXM6 262 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RDH10Q8IZV5 341 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 OR4K13Q8NH42 304 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ZFAND1Q8TCF1 268 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RSC1A1Q92681 617 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CNTNAP3BQ96NU0 1288 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NSUN5Q96P11 429 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 PRRT1Q99946 306 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SLC25A31Q9H0C2 315 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CHRDQ9H2X0 955 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 TP63Q9H3D4 680 aaPredicted RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 CUTCQ9NTM9 273 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 LOC105369274A0A096LPK9 316 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NFKBIEO00221 500 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SLC1A7O00341 560 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GPR137BO60478 399 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GPR32O75388 356 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SEC14L2O76054 403 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 CER1O95813 267 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 STSP08842 583 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 AKAIN1P0CW23 69 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RPS2P15880 293 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 BPIP17213 487 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CHATP28329 748 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PKLRP30613 574 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 HOXC13P31276 330 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CDKN2DP55273 166 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 DCAF7P61962 342 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ARG2P78540 354 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ARHGAP19Q14CB8 494 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NNATQ16517 81 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 TMEM244Q5VVB8 128 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PDZD3Q86UT5 571 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 OR4N4Q8N0Y3 316 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 STEAP2Q8NFT2 490 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GPR150Q8NGU9 434 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SLC2A12Q8TD20 617 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RDH14Q9HBH5 336 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ANKMY1Q9P2S6 941 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 DNAJB11Q9UBS4 358 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PCTPQ9UKL6 214 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 HCRTO43612 131 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PPP1R3DO95685 299 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CTSAP10619 480 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PTNP21246 168 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SSTP61278 116 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 BLOC1S1P78537 153 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 HTD2P86397 168 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RBM39Q14498 530 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 RGNQ15493 299 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 DPY19L2P1Q6NXN4 242 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 IGDCC3Q8IVU1 814 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 OR4K5Q8NGD3 323 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 MSANTD3Q96H12 275 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 IL17FQ96PD4 163 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CACNG6Q9BXT2 260 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 TXNRD2Q9NNW7 524 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 A0A1W2PPK0 400 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 C2orf78A6NCI8 922 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 HMX3A6NHT5 357 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 SRPX2O60687 465 aaPredicted RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 POU3F2P20265 443 aaPredicted RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 IDUAP35475 653 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ALDH3B1P43353 468 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CSNK1A1P48729 337 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 WNT4P56705 351 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 VEZF1Q14119 521 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 GPR139Q6DWJ6 353 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 NADSYN1Q6IA69 706 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 TLDC1Q6P9B6 456 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 DPPA4Q7L190 304 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PLEKHO2Q8TD55 490 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PGAP3Q96FM1 320 aaPredicted RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 TRMT2BQ96GJ1 504 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 CRB3Q9BUF7 120 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 RBM24Q9BX46 236 aaKnown RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 ALOXE3Q9BYJ1 711 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 ZNF395Q9H8N7 513 aaPredicted RBP6.12□□□□□ -1.43
UPF2-201ENST00000356352 PLEKHJ1Q9NW61 149 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 CD207Q9UJ71 328 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 FBXO7Q9Y3I1 522 aa6.12□□□□□ -1.43
UPF2-201ENST00000356352 PLSCR5A0PG75 271 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 C17orf105B2RV13 164 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 PAHP00439 452 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ITGB7P26010 798 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TNFRSF4P43489 277 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 PTH2RP49190 550 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms