RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PRKACAP17612 351 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF169Q14929 603 aaPredicted RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 UPP1Q16831 310 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RPS26P11Q5JNZ5 115 aaPredicted RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 CNIH2Q6PI25 160 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 EGFL6Q8IUX8 553 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RBM12BQ8IXT5 1001 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TERB2Q8NHR7 220 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 IGSF21Q96ID5 467 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TXNDC15Q96J42 360 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TEPSINQ96N21 525 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 USB1Q9BQ65 265 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 HIF1ANQ9NWT6 349 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 GHRLQ9UBU3 117 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 GPR37L1O60883 481 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 APLNRP35414 380 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 MAP4K2Q12851 820 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TP53I3Q53FA7 332 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 METTL2BQ6P1Q9 378 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 NETO1Q8TDF5 533 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 HAVCR2Q8TDQ0 301 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TSACCQ96A04 125 aaPredicted RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 PTERQ96BW5 349 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF578Q96N58 590 aaPredicted RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 MRI1Q9BV20 369 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 ENPP4Q9Y6X5 453 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 A6NIZ1 184 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 MRPS14O60783 128 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 ALDOBP05062 364 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TPT1P13693 172 aaKnown RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RAP1BP61224 184 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 RAP1AP62834 184 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 SIM1P81133 766 aaPredicted RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 SDSLQ96GA7 329 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF419Q96HQ0 510 aaPredicted RBP14.1□□□□□ -0.15
LMX1B-201ENST00000355497 KCNJ16Q9NPI9 418 aa14.1□□□□□ -0.15
LMX1B-201ENST00000355497 TSTD3H0UI37 97 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MPIG6BO95866 241 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 LCATP04180 440 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 GAAP10253 952 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 DAP3P51398 398 aaKnown RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 TMPRSS7Q7RTY8 843 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF417Q8TAU3 575 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 ITPKCQ96DU7 683 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 DPH1Q9BZG8 443 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF160Q9HCG1 818 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MARCH4Q9P2E8 410 aaPredicted RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 OIP5O43482 229 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 RPL23AP62750 156 aaKnown RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 SF3A2Q15428 464 aaKnown RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 RGNQ15493 299 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 NSDHLQ15738 373 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 TAS1R3Q7RTX0 852 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 SUMF2Q8NBJ7 301 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 FNDC9Q8TBE3 224 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 NPRL2Q8WTW4 380 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 BRI3BPQ8WY22 251 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MAL2Q969L2 176 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MMP28Q9H239 520 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 SACM1LQ9NTJ5 587 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 CD300AQ9UGN4 299 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 RNF4P78317 190 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 GPR50Q13585 617 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 AGAP7PQ5VUJ5 663 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 AGAP6Q5VW22 663 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 TMEM185AQ8NFB2 350 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 AGAP4Q96P64 663 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 RDH14Q9HBH5 336 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 NME7Q9Y5B8 376 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF736B4DX44 427 aaPredicted RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 FIGLAQ6QHK4 219 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MRPL21Q7Z2W9 205 aaKnown RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 SYNPRQ8TBG9 265 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MOCOSQ96EN8 888 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 FAM71F1Q96KD3 344 aaPredicted RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 MS4A4EQ96PG1 132 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 SERINC2Q96SA4 455 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 HERPUD2Q9BSE4 406 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 RBM24Q9BX46 236 aaKnown RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 ABCC6O95255 1503 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 BMP2P12643 396 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 RAB6AP20340 208 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 ADARB1P78563 741 aaKnown RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 TDGQ13569 410 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 GRM7Q14831 915 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 C18orf21Q32NC0 220 aaPredicted RBP14.09□□□□□ -0.15
LMX1B-201ENST00000355497 STEAP4Q687X5 459 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 PLXDC1Q8IUK5 500 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 C3orf58Q8NDZ4 430 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 OR52B6Q8NGF0 335 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 HAS2Q92819 552 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 TBC1D20Q96BZ9 403 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 PCDHA9Q9Y5H5 950 aa14.09□□□□□ -0.15
LMX1B-201ENST00000355497 IRS2Q9Y4H2 1338 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 E7ESA3 106 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 AGPAT2O15120 278 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 HBQ1P09105 142 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 OTX2P32243 289 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 SUOXP51687 545 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms